KEGG   Oncorhynchus keta (chum salmon): 127922118
Entry
127922118         CDS       T09424                                 
Name
(RefSeq) pre-mRNA-processing factor 17-like
  KO
K12816  pre-mRNA-processing factor 17
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127922118
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oke03041]
    127922118
Spliceosome [BR:oke03041]
 Complex C
  Other components
   Step II factors
    127922118
SSDB
Motif
Pfam: WD40 WD40_Prp19 WDR55 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_DCAF4 WDR54 Beta-prop_DCAF12 eIF2A Beta-prop_IFT140_1st WD_LRWD1 PQQ_2 Beta-prop_WDR19_1st Beta-prop_Vps41
Other DBs
NCBI-GeneID: 127922118
NCBI-ProteinID: XP_052361746
LinkDB
Position
Unknown
AA seq 284 aa
MTCSGIRGPRQNNRTGRICAYVRCKCFSLVSLPSGHSKAVRDICFNNTGTQYMSAAYDRY
LKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDARTGEVVQEYD
RHLGAVNTITFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKW
LACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIW
DWKTTKLYHRIKAHDKVCISALWHPHETSKVITCGWDGLIKLWD
NT seq 855 nt   +upstreamnt  +downstreamnt
atgacatgcagtgggatcagggggccaagacagaataacagaacaggaagaatatgtgca
tatgtaaggtgtaagtgtttctctcttgtctctctcccttcaggccacagtaaagcagtg
cgggatatctgcttcaacaacactgggactcagtacatgagtgcagcctacgaccgctac
ctcaaactctgggacacagagacaggccagtgcatttcccgcttcacaaaccggaaggtg
ccgtactgcgtcaagttcaacccagatgaggacaagcagaaccttttcgtggccggcatg
tctgataagaagatcgttcagtgggacgcaaggacaggggaggtggttcaggagtatgac
cgtcacctgggcgcggtcaacaccatcacgttcgtggatgagaaccgccgtttcgtcagc
acgtcagatgacaagtccctccgcgtgtgggagtgggacattcccgtggacttcaaatac
atcgcagagcccagtatgcactctatgcctgctgtaacgctttcacccaatggtaagtgg
ctggcctgccagtccatggacaatcagatcctgatatttggagcccagaaccgtttccgt
ctgaacaagaagaagatcttcaagggccacatggtggctggctacgcctgccaggtggac
ttctccccagacatgagctatgtggtgtctggcgatgcggatgggaagctgaatatctgg
gactggaagacaaccaagctgtaccaccggatcaaggcccacgataaggtgtgcatcagt
gccttgtggcacccccacgagacctccaaggtcatcacctgtggctgggacggactgatc
aaactctgggactag

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