Oncorhynchus keta (chum salmon): 127922184
Help
Entry
127922184 CDS
T09424
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127922184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oke03021
]
127922184
03019 Messenger RNA biogenesis [BR:
oke03019
]
127922184
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
127922184
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
127922184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
zf-CCCH_4
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
127922184
NCBI-ProteinID:
XP_052361825
LinkDB
All DBs
Position
Unknown
AA seq
267 aa
AA seq
DB search
MCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFL
HIDPESKIKDCPWYDRGFCKHGPDCRHRHTRRVICMNYLVGFCPEGRSCKFMHPRFELPM
GATEQPPLPAQILGHQKPLPSLGRSSLSLIQLTNPGGGAGPHQHQHHQRQPYSSGPSMHQ
HHNNMGGGNRGPRPLDQVTCYKVNRDHTHTHVCHTAPNLFQYQYTCVCVRLGFYLIVGPQ
CNVPAFTVKAVDFILKLPFKSCIVDHQ
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgtgtccgttccgtcacatcagtggggagaagacggtggtgtgtaaacactggctcaga
ggactctgtaagaagggagaccagtgtgagttcctacacgagtacgacatgaccaagatg
cccgagtgctacttctactccaagttcggtgagtgcagtaacaaggagtgccccttcctc
cacatcgacccagagtctaagatcaaagactgtccctggtatgacagaggcttctgcaaa
catggtccagactgtagacaccgccacaccagaagagtaatctgtatgaactacttggtt
ggtttctgtccagagggccggtcctgtaaattcatgcacccgcggtttgagctgccgatg
ggggccacggaacagcctcctctaccagcacagatactgggtcaccagaagccgttgcct
tcgcttggccgctcgtccctgtcactcatccagctgaccaatcctgggggaggtgcaggt
cctcaccagcatcaacaccatcaacgccagccgtactcctctggtcccagcatgcatcag
caccacaacaacatgggaggagggaacaggggtccacgcccactagaccaggtcacctgc
tacaaggtaaacagagaccacacacacacacacgtctgtcacacagcccccaacctgttt
caatatcaatatacctgtgtttgtgtcaggctgggattctatctaattgttggtccacaa
tgcaatgttcccgcattcacagtaaaagctgtagatttcattctgaaattgccttttaaa
agctgcattgtggaccaccagtga
DBGET
integrated database retrieval system
