Oncorhynchus keta (chum salmon): 127922397
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Entry
127922397 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2-like
KO
K09654
beta-1,3-N-acetylgalactosaminyltransferase 2 [EC:
2.4.1.313
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00515
Mannose type O-glycan biosynthesis
oke01100
Metabolic pathways
Module
oke_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
127922397
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oke01003
]
127922397
Enzymes [BR:
oke01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.313 protein O-mannose beta-1,3-N-acetylgalactosaminyltransferase
127922397
Glycosyltransferases [BR:
oke01003
]
Glycan extension
Wide specificity
127922397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
127922397
NCBI-ProteinID:
XP_052362068
LinkDB
All DBs
Position
Unknown
AA seq
328 aa
AA seq
DB search
MSNSCWCRPAAEAVVTACFSPLSPGTSLNGVWHKPVEWFILPKGFEGTLVWESPDLAGLT
TVNTSRVKLNNGGGVLKFSSIDEGTLPHRSAXGFPGLAGGFTFRIHDMASLWEVLHGRQG
RIQSHGTRLQMEDRSLEQEGLRYGDIVFVDVVDTYRNVPSKLLQFYKWSVGNAAFDLLLK
TDDDCYIDVDKVLMKIDHKGLKRHNFWWGNFRQSWAVDRIGKWQELEYASPAYPAFACGS
GYVASRDLVQWLASNAEQLKAYQGEDVSMGIWMAAVGPQKYQDAGWLCEKDCYQDMLSSP
QHSPEELRSLWARKRACGDPCGCPWGHS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaactcctgctggtgtagaccagcagcagaggcagtggtgacggcctgcttcagc
ccgctcagtcctgggacaagtctgaacggtgtgtggcacaaaccagtggagtggttcatt
ctgcccaagggctttgaggggactctggtctgggagagtcctgacttagctggtctgact
acggtcaacacatcccgggtgaagctgaacaacgggggaggagtcctcaagttttcctct
atcgatgaggggacgttgcctcacaggagtgctnctggcttcccagggttggctggaggg
ttcaccttcagaatccatgacatggcctccctgtgggaggtgctgcatggccgacagggt
cggatccagagtcacggcaccagactgcagatggaggacaggtctctggagcaggagggt
ctgcgatatggagacatagtgtttgtggatgtagtagatacatacaggaacgtgccttct
aaactactgcagttctacaagtggtcggtgggaaacgctgcgtttgatctgctcctgaag
acggatgatgattgttatattgacgtggacaaggttttaatgaagatcgaccacaagggc
ctgaagagacacaacttctggtggggaaatttccgtcagagctgggcggtggaccgcatt
gggaagtggcaggagctagaatacgccagtccagcctacccggccttcgcctgcggctcg
ggctacgtggcctccagggacctcgtccaatggctggccagcaatgcagagcaactcaag
gcctaccagggggaagatgtgagcatggggatctggatggctgctgttggaccacagaaa
taccaggatgcaggctggctgtgtgagaaggactgctaccaggacatgctgtcgtcgccc
caacactcccccgaggagctccgctcgctctgggctaggaagagggcctgcggggacccc
tgtggatgtccctggggacacagctaa
DBGET
integrated database retrieval system
