Oncorhynchus keta (chum salmon): 127924272
Help
Entry
127924272 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRAF7-like
KO
K10646
E3 ubiquitin-protein ligase TRAF7 [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
127924272
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127924272
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
127924272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_SCAP
EIF3I
WDR55
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_IP5PC_F
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
zf-C3HC4_4
Beta-prop_WDR75_1st
Sina_ZnF
zf-TRAF
zf-C3HC4_3
Beta-prop_SPT8
zf-RING_5
DUF16
DUF1664
Filament
DUF4164
Sina_RING
HMMR_N
Motif
Other DBs
NCBI-GeneID:
127924272
NCBI-ProteinID:
XP_052364792
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MEASFGPTFSAVVPGAKTEASGTYKQHRRTPSSSSTLTYSPRDDEDGMLPISTPRRSDSA
ISVRSLLSESNMSLRSTFSLHEDDDDTEPLVFAEQPSVKLCCQLCCSVFKDPVITTCGHT
FCRRCALTSDKCPVDTAKLTVVVNNIAVAEQIGELFIHCKYGCRLLNTSPTSPNGAGGGA
SPNGAGGGTAASRGEGTPKMGGPGNFEVDPMGCPFTIKLTTRKEHEVSCDYRPVRCPNNP
SCPPLLTMNLEGHLKECEHIKCPHSKYGCAFIGNQDTYSTHLDLCKFEGLKEFLQQTDDR
FHEMQVTLSQKDQDIAFLRSMLGKLSEKLDQLEKNLELKFDVLDENQSKLSEDLMEFRRD
ASMLNDELSHINARLNMGILGSYDPQQIFKCKGTFVGHQGPVWCLCVYSTGDLLFSGSSD
KTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGNRLYSGSADCTIIVWDVQTLQKVNTIRA
HDNPVCTLVSSHSMLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVASQNHLYSGS
YQTIKVGGQEVWCVIIVKAWGCVVVLGYSY
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggaggcctccttcggccccaccttctcagccgtggttcctggagctaaaacggaagcc
tccggtacctacaagcagcaccgccgtaccccctcctcctccagtaccctcacatactcg
ccacgagacgacgaggatggcatgctccccatcagcaccccgaggcgttctgactctgcc
atctcggtgcgttcccttctctctgagtccaacatgtctctccgctcgaccttctctctt
cacgaggacgacgacgacacggagcccctggtgtttgcagagcagccgtcggtgaagctg
tgttgtcagctctgctgcagcgtcttcaaagaccctgtcatcaccacctgtgggcacacc
ttctgcaggcgatgtgccttgacctccgataagtgtccggtggacacggctaagttgacg
gtggtggtgaacaacatagccgtagcagaacagataggagagctgtttatccactgtaaa
tacggctgccggctcttaaacaccagccccacttcccctaacggggccggaggaggggct
tcccctaacggggccggaggaggcactgctgctagtcggggtgaagggacacctaagatg
ggaggacctgggaactttgaggttgatccaatgggctgtccttttaccatcaagctcacc
acacgcaaggagcacgaggtgagctgtgactaccgtccagtgcgctgtcccaacaacccc
tcctgccctcctctcctcaccatgaacctggagggacaccttaaggaatgtgaacacatc
aagtgccctcactccaaatacggatgtgcgtttatcggtaaccaggatacatattccaca
cacctggacctgtgtaagtttgaagggctgaaggagttcctgcagcagacagatgacagg
ttccatgagatgcaggtgaccctgtctcagaaggaccaggacattgccttcctgaggtcc
atgttggggaaactgtctgagaaactggaccagctggagaagaacctggaactgaagttt
gatgtcctggatgagaaccagagtaagctgagtgaagacctgatggagtttaggagagat
gcctccatgctcaacgatgagttgtcccacatcaacgccagactcaacatgggcatcctg
ggctcctacgacccccagcagatctttaaatgtaaagggacgttcgtaggtcaccagggg
ccagtctggtgtctgtgtgtctactctacaggggacctgctcttctctgggtcctcggac
aagaccatcaaggtgtgggatacctgcaccacctataaatgtcagaagactctggagggt
catgatggaatcgtgctggcactgtgtatacaggggaacagactgtatagtggctcagct
gactgcaccatcatagtgtgggacgtccagaccctgcagaaggtgaacacaatccgtgcc
catgacaacccggtgtgtacgctggtgtcctcccacagcatgctgttcagcggatccctc
aaggccatcaaggtgtgggacatagtggggacagagttgaagctgaagaaggagttaacg
ggactgaaccactgggttcgtgctctggtggcctctcagaaccacctctacagtggatcg
taccagaccatcaaggtaggaggacaggaagtgtggtgtgtcatcatagttaaagcatgg
ggatgtgtggttgtacttggctacagttactaa
DBGET
integrated database retrieval system
