Oncorhynchus keta (chum salmon): 127925164
Help
Entry
127925164 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oke04054
]
127925164
Pattern recognition receptors [BR:
oke04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127925164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
PRY
NOD2_WH
SPRY
LRR_6
LRR_4
PYRIN
Motif
Other DBs
NCBI-GeneID:
127925164
NCBI-ProteinID:
XP_052365896
LinkDB
All DBs
Position
Unknown
AA seq
1106 aa
AA seq
DB search
MSLTGEREERGPASKMSLTGEREEGGPASKMSLTGEREKGGPASKKNVSGEHGTKSKSPI
KQERPASPVPSCVSMKSDWSMDHPIEFREGDFSTEQRNQQERSESEILRGQSSQSHQTDL
ASIFSMLEQNIMTFVKNELKIFKRILSPELPEGFESQNQDKEVVDAEDEKQESSAREGAL
KITLHILRKMNQKELADTLDKYELAVICQRELKSNLKKKFQCVFEGIAKQGNPTLLNKIY
TELYITEGGTGEVNNEHELRQIETTTRKQARPETPFKCNDIFKPLTGQDKPIRTVMTKGV
AGIGKTVSVQKFILDWAEGKANQDVQFVFSFPFRELNLMKADQHTFIELLNHFSMETKQS
RISNYDKYKVVFIFDGLDECRLPLDFQKNKICCDVTESTSVDVLLTNLIKGNLLPSALLW
ITTRPAAANKIPSGCVDQVTEVRGFNDPQKEEYFRKRFSDEDLASRIISHIKTSRSLHIM
CHIPVFCWISATVLEYMLKHKREEMPKTLTEMYTHLVDVHTKQKNEKYLGKEETGPHWNK
ESILSLGKLAFQQLVKGNLIFYEEDLKEAGIDVNEASVYSGLCTQLFKEECGLYQDKVYC
FVHLSIQEFLAAVYVFLSFINNNENLMAEPQTKSSIFASLFRDKPEVTVFKSAVDKALQS
ETGNLDLFLRFLLGLSLESNQKHLRGLLTKTRSSSQSHEETIKYIKKKIRENPSPERSIN
LFHCLNELNDHSLVEEIQRYLRSGSLSEHNLSPAQWSALVFVLLTSEKELDVFDLKKFSR
SEEGLLRLLPVVKASRAVLLSGCGVTEEGCASLVSALESNPSHLRELDLSNNDLKDSGVE
LLSAVLENPHCKLETLRLSGCLVTEEGCASLVSALRSNPSHLRELDLSYNHPGDSGVRLL
SAGLEDPHCRLEKLNVEHGGENRMKPGLRKYVCDLTLDLNTVNRFLSLSEENRKVTWRTE
EQPYPDHPERFEGCRQVLCREGLTGRCYWEVEWSGRGAVIGVTYKGINRRGGVEDCCLGH
NDKSWSLDCSDNSYSAWNNSNPTTIDVPSSSSHRVGVYLDWPAGTLSFYRASSDTLTHLI
TFTSTFTEPLYPGFWVWDDGESVSLK
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcactggggagagagaggagaggggccctgcctctaaaatgagtctcactggg
gagagagaggaggggggccctgcctctaaaatgagtctcactggggagagagagaagggg
ggccctgcctctaaaaagaatgtctctggggaacatggcaccaaatctaagagcccaatc
aagcaggagagaccagcctcccctgttcccagctgtgtgtccatgaagagtgactggtct
atggatcatcctatagagtttagagagggagacttttctactgaacaaagaaaccaacag
gagagatcagagtcagagattctcaggggtcagtcttcccagagtcatcaaacagacctg
gcctccatattcagtatgcttgaacagaatattatgacatttgtgaagaacgagctgaag
atattcaagaggatccttagtccagaactcccagaaggctttgagagtcagaatcaggat
aaggaagtggtggacgctgaagatgagaagcaggagagcagtgccagagagggggctctg
aagatcacactgcacatcctgaggaaaatgaaccagaaggagcttgctgacacactggat
aaatatgagcttgctgtgatttgccaacgtgaactcaaatctaatctaaagaagaagttt
caatgtgtatttgaggggatcgctaaacaaggaaacccaacacttctcaataagatctac
acagagctctacatcacagagggtggaacaggagaggtcaataatgaacatgagctgaga
cagattgagacaacaaccaggaaacaagcaagaccagagactccattcaaatgcaacgac
atcttcaaacccttaactggacaagacaaacctatcagaactgtgatgacaaagggagtc
gctggcattggaaaaacagtctctgtgcagaagttcattctggattgggctgaaggaaaa
gcaaatcaggatgtccaatttgtgttttcattcccttttcgggagctgaatttgatgaaa
gcggatcaacacactttcattgaacttctcaatcacttctcaatggaaaccaaacaatca
agaatctccaactatgacaagtacaaagttgtgttcatctttgatggtctggatgagtgc
cgactgcccctagacttccagaagaacaagatctgttgtgacgtcacagagtcaacctca
gtggatgttctgctgacaaatctcatcaagggaaatctgcttccctctgctctcctctgg
ataactacccgacctgcagcagccaataagatcccttcagggtgtgttgaccaggtgaca
gaggtacgagggttcaatgacccacagaaggaggagtacttcaggaagagattcagtgat
gaggacctggccagcagaatcatctcacacataaagacatcaaggagcctccacatcatg
tgccacattccagtcttctgttggatttctgcaacagtccttgaatacatgctgaaacat
aagagagaagagatgcccaagactctgactgagatgtacacacaccttgtggatgttcat
accaaacagaagaatgaaaagtatcttgggaaagaagagacaggtccacactggaataaa
gagagcattctgtcactgggaaaactggcttttcagcagcttgtgaagggcaatctgatt
ttctatgaagaagacctgaaagaggctggcattgatgtcaacgaagcctcagtgtactca
ggattgtgcacacagctctttaaagaggaatgtgggctgtaccaggacaaggtgtactgc
tttgttcatctgagcattcaggagtttctggctgctgtatatgtgttcctctcattcatc
aacaacaatgagaatctaatggccgaaccgcaaacaaagtccagcatctttgcttcgctg
ttcagagacaagcctgaagttactgtcttcaagagtgctgtggataaagccttacaaagt
gagacgggaaacctggaccttttcctccgcttccttctgggcctctcactggagtccaat
cagaagcacttacgaggtctactgacaaagacaagaagcagctcacagagccatgaagaa
acaatcaagtacatcaagaagaagatcagggagaatccctctccagagaggagcatcaat
ctgttccactgtctgaatgaactgaatgaccattctctagtggaggagatccaaagatac
ctgagatcaggaagtctctcagaacacaacctgtcacctgcacagtggtcagctctggtc
tttgtgttgctgacttcagaaaaggagctggatgtgtttgacctgaagaaattctccaga
tcagaggaaggtcttctaaggctgctgccagtggtcaaagcctccagagctgttctgctg
tcaggctgtggagtcacagaggaaggctgtgcttctctggtctcagctctggagtcaaac
ccctcacacctgagagagctggatctgagtaacaatgacctgaaggattcaggagtggag
ctgctctctgctgtactggagaatccccactgtaaactggagactctgaggctgtcaggc
tgtctagtcacagaggaaggctgtgcttctctggtctcagctctgaggtcaaacccctca
cacctgagagagctggacctgagctacaatcacccaggagactcaggagtcagactgctc
tctgctggactggaggatccacactgcagactggagaaactcaatgtggaacatggtgga
gagaacagaatgaaacctggacttagaaaatatgtctgtgatctcacactggacctaaac
acagtaaacagattcctctctctgtctgaggagaacagaaaggtgacatggaggacagag
gagcagccgtatcctgatcacccagagagatttgagggctgtagacaggtgctgtgtaga
gagggtctgactgggcgctgttactgggaggtagagtggagtgggagaggggctgttata
ggagtgacatataaaggaatcaacaggagaggaggggttgaggactgttgtcttggacac
aatgacaagtcctggagtctggactgctctgacaacagttactctgcctggaacaatagt
aatcccactaccatagacgtcccctcctccagctcccacagagtaggagtgtatctggac
tggccagccggcactctgtccttctatagagcctcctctgacacactgacccacctgatc
acattcacctccacattcactgagcccctctatccagggttttgggtttgggatgatggt
gaatcagtgtccctgaaataa
DBGET
integrated database retrieval system
