Oncorhynchus keta (chum salmon): 127925915
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Entry
127925915 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: actin-related protein 2/3 complex subunit 1A-like
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04144
Endocytosis
oke04517
IgSF CAM signaling
oke04530
Tight junction
oke04810
Regulation of actin cytoskeleton
oke05100
Bacterial invasion of epithelial cells
oke05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
127925915
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127925915
09144 Cellular community - eukaryotes
04530 Tight junction
127925915
09142 Cell motility
04810 Regulation of actin cytoskeleton
127925915
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127925915
05100 Bacterial invasion of epithelial cells
127925915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
127925915
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oke04812
]
127925915
Membrane trafficking [BR:
oke04131
]
Others
Actin-binding proteins
Arp2/3 complex
127925915
Cytoskeleton proteins [BR:
oke04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
127925915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_Gbeta
Rax2
Beta-prop_HPS5
RMC1_N
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_WDR36-Utp21_1st
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
127925915
NCBI-ProteinID:
XP_052367168
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MSLHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYQKSGNQWVKSHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSLKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESDNDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKP
GPTPWGSKMPFGAVLAEFGGAGGGWVHSVSFSSSGNRLAWVSHDSTVTVVDGTKGSTPSQ
LKTEFLPLLSVLFISENSVVAAGHDCCPMLFRCDDGGSLTFVSKLDLPKASITRNISAME
RFRNMDKRATTEDRNTALETLHQNSITQVSIYEGDQSDCQKFCTTGIDGAMTIWDFKSLE
ASIQGLRIM
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgcaccagtttctgcttgagcccatcacctgtcacgcctggaaccgggacaga
acccagatcgccatcagtcccaacaaccatgaggttcacatctatcagaagagcggtaac
cagtgggtgaagagtcatgagctgaaggagcacaatggacacatcacaggtatcgactgg
gctcctaagtccgaccgtatcgtgacgtgtggggcggatcgtaacgcctacgtctggtct
ctgaaggacggcgtctggaagcccacgctggtcatcctgaggatcaacagagctgcgacc
ttcgtcaagtggtctcctctggagaacaagttcgctgtgggcagcggagccagactcata
tcagtctgttacttcgagtctgataacgactggtgggtgagtaagcacatcaagaagccg
atccgttccaccgtcctcagtctggactggcatcctaacaacgtgctgctggcggctgga
tcctgtgacttcaaatgcagggtgttctcggcctacatcaaggaggtggaggagaagccg
ggccccaccccctgggggtccaagatgccgtttggggcggtgctggctgagtttgggggt
gccgggggaggatgggtccactctgtgtccttctcctcatctggtaacagactggcctgg
gtctcacacgactccactgtcactgtggtggatggtaccaagggatccactccgtctcag
ttgaagacagagttcctccctctgctcagtgttctcttcatctctgagaacagcgtagtg
gcagcgggtcatgactgttgtcccatgctgttccgttgtgatgacggagggtccctgacg
tttgtctctaagctggaccttcccaaagcctccatcactagaaacatctccgctatggag
cgtttcagaaacatggacaagagagcgactacagaggaccgtaacacagccctggagaca
ctgcaccagaactccatcactcaggtctccatctatgagggagaccagtctgactgtcag
aagttctgcaccacgggcatcgatggagccatgaccatctgggacttcaagagtctggag
gcgtccatccaggggctgaggatcatgtga
DBGET
integrated database retrieval system
