Oncorhynchus keta (chum salmon): 127926428
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Entry
127926428 CDS
T09424
Name
(RefSeq) BRCA1-associated ATM activator 1-like
KO
K23112
BRCA1-associated ATM activator 1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oke03400
]
127926428
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
127926428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
HEAT
HEAT_EZ
Piezo_TM1-24
Motif
Other DBs
NCBI-GeneID:
127926428
NCBI-ProteinID:
XP_052367804
LinkDB
All DBs
Position
Unknown
AA seq
878 aa
AA seq
DB search
MDSECLVLLPRVCAVLADPRQSLPDDTSLEKLLDWFTGLTKEDHGLALLESCPCLVDYIS
TACLDKTTDPSMLSFSLKLSGLLAASQHGFNLLQDRSILGVAYDSERWQVAGQWEDPSVR
IGWIHGLSNMMRHTQAFHFLDQAGLTKPLLQLQTDPSLFVASAANHLLARLLTFHQPATT
SHTTQGNGLTVPPNKEEVELDVTMETSPGSGCSITMEILKHLESSLESDSHTQVLQGLRL
LALTLPELEAPLRGSVIRRVLRSLEGLVREGAVAQPLMDVLLATYRSGPCDSRLVSLMAS
MLNSQNPSDAALCAAATLHPETCPPGLRQKIVAVLLGPLQMVTGVTLLDWPNDRHTDEQT
DHRHTDQQTDHRHTDEDHRQTDEDHRHTDQQTDHRHTGQQTDNRQTDQQTDNRQTDQDRQ
TEGRSSLSLLLHHLNHKPSCVSLLCVSVSSAPYITDMDSSASVILAVVSLLRICNGHSPS
PESKAAIGCSKASTNLIGCSKVQRCCLDSLASLSTCPGAVERVAEVFHVLVQNLQNPDSD
PTVLQKNYQAMLRWLRVSAEPHSLADLVTEDLLPVLKKRVCDVRWEVRDSTLEFLGQLCE
ALSCTVTPILLEALCDQESYVRASAISALARTLPLSDQQGEPGNQTQEQILGQLLDILSQ
DSEGFPRRAVVQFFISWLKTHPSSSSSSLCSVLSLGSTDLDWEVKVHTLELVELLMEETL
PGHQESELGSTPPPYGGSGGTNLLTHTDLTHPYAVTPSQPSPLLTHTPTDTHTPLTHTHP
TTSVVCGLSRLVELGVITALFNGLFDCDRPVALKACSLLLRLRDAVCPSRSLGKGAMTTD
DTTVAKVTFDLRVRFGSGRSRGSYRRREDLIGLKSPGK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgagtgcctggtgttgttgcctcgggtgtgcgctgtactagcggaccccaga
cagtccctaccagatgacaccagcctcgagaaactgctggactggttcactggtctcacc
aaggaggaccatggcctggccctgttggagtcctgcccctgtctggtggactacatatcc
accgcgtgtctggacaaaactacagatcccagcatgctttccttcagcctcaagctttcc
ggcctgctggcggccagccaacacggcttcaacctgctgcaggatcgatccatcctgggc
gtggcctacgacagcgagcgatggcaggtggctggccaatgggaggatccgagcgtgcgg
attggctggatccatggcctgagtaacatgatgcgccacacacaggccttccacttcctg
gatcaggctggcctgaccaaacccctcctccagctacagactgaccccagcctattcgtc
gcctcggccgcaaatcacctcctggcccgcctcctaaccttccaccagccggctacaacc
tcacacacaacccaggggaatggcctcactgttccacccaataaggaagaggtagaattg
gacgtaaccatggagacaagtccaggaagcgggtgttccatcaccatggagatcttgaag
cacctggagagctctctggagtcagacagccacacccaggtgctccaggggctgaggctg
ctggccctgactctccccgagctggaggctcctctgcggggctcggtgatcaggcgagtc
ctgaggtctctggaggggttggtccgagaaggagcagtggctcagcctctaatggacgtc
ctgctggctacatacaggtccggtccgtgtgactccagactcgtctctctgatggcgtcc
atgttgaactcccagaatccctctgacgctgctctgtgtgccgccgccaccctccatccg
gagacctgtcctccaggcctcagacagaagatcgtagctgttctgctgggacctctacag
atggttactggagtaactctgctggactggcccaatgacagacacactgatgaacagact
gaccacagacacaccgatcaacagacagaccacagacacactgatgaagaccacagacag
actgatgaagaccacagacacactgatcaacagactgaccacagacacactggtcaacag
accgataacagacagactgatcaacagaccgataacagacagactgaccaggacagacag
acggagggtcgtagctctctctctctcctgctgcatcatctcaaccacaaaccctcctgt
gtctctctgctctgcgtctccgtgtccagcgctccctacataacagacatggattcatct
gcctccgtcatccttgctgtggtgtcactcctgaggatctgtaacggccactccccctca
cccgagagcaaggctgctattggctgtagcaaagcatccaccaacctgattggctgcagc
aaggtccagaggtgttgcctagactccctggctagccttagcacctgccctggagctgtg
gaacgggtggcggaagtgttccatgttctagtgcagaacctacagaaccctgactcagac
cccaccgtgctccagaagaactaccaggccatgttgaggtggcttcgtgtgtctgcagag
cctcactcactggctgatctggtcactgaagacctcctgcccgtgctaaagaagcgtgtg
tgtgacgtgcgttgggaggttcgagactccactctggagttcctcggccagctgtgtgag
gcgttaagctgcaccgtcactcctatcctgctggaggcgctgtgtgatcaggagagctat
gtgagggctagtgccatctctgccctggccaggacactaccactcagtgaccagcagggg
gagccagggaaccagacacaggaacagatcctgggtcagttactagacatcctgtctcag
gattcagagggcttccccagacgtgctgtggtccagttcttcatcagctggctaaagaca
cacccatcatcttcctcctcctcgctgtgttctgtcctatcgctgggcagcactgatctg
gactgggaggtcaaagttcacaccctggagctggttgagctcctgatggaggaaacacta
ccaggtcaccaggagtcagagctggggtcaactcctcccccttacggtggctctggaggg
acaaacctactaacacacactgacctcacacatccctacgctgtgacgccaagccagccc
tcaccccttctaacacacaccccaactgacacacacacccccctcacacacacacaccca
actacatctgtagtgtgtggtctgtctcggttggtggagctcggtgttataacagcgtta
ttcaatggcctgtttgattgcgacagacctgtagctttaaaagcctgtagtctgttgcta
cgactacgagacgcggtgtgtccgtcccggtcgctagggaaaggtgccatgacaactgac
gacacaacagttgccaaggtgacttttgatctgagggtcaggtttgggagcgggaggtca
cgaggaagttacaggagaagagaggatctgattgggttaaagagtccagggaagtag
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