Oncorhynchus keta (chum salmon): 127928999
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Entry
127928999 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: DNA topoisomerase 3-alpha-like
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03440
Homologous recombination
oke03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127928999
03460 Fanconi anemia pathway
127928999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oke03032
]
127928999
03400 DNA repair and recombination proteins [BR:
oke03400
]
127928999
Enzymes [BR:
oke01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
127928999
DNA replication proteins [BR:
oke03032
]
Eukaryotic type
DNA Topoisomerases
127928999
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
127928999
FA (Fanconi anemia) pathway
127928999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
127928999
NCBI-ProteinID:
XP_052372603
LinkDB
All DBs
Position
Unknown
AA seq
1013 aa
AA seq
DB search
MLIHHLTRALFTSGRPLPLRIQVHRGLSVTGQKRTDSPGDMIRRTPIKRVLCVAEKNDAA
KGIAEIMSDGRARRREGLSVYNKLYEYEYNLFGRNVAVCMTSVSGHLLGLEFKAQFQKWH
SCNPVLLFDAEVEKYCPENFVQIKRTLEREVSQCQALVIWTDCDRXGENIGFEVIDVCKA
VKPGVQVFRARFSEITPNSIRRACDTLTEPDGNVSDAVDVRQELDSPDSQFKPSRQFIQH
IYKIQLVLHEVEEESVEFSWKRNRLFNHTACLVIYQICLEDPIATVTSVTSKPKSKWRPL
PLDTVEMEKLVSRKLRIGAKETMKIAEKLYTQGFISYPRTETNLFPKDLALGPLVEHQTH
SPSWGAFARGVMEQPGGPNPRQGTKTDQAHPPIHPIKYTNTLQGNEQRVYEFIVRHFLAC
VSLDAVGQETVVEVEMAHERFSANGLMIIRRNYLDVYPYDRWSTKVIPVYEQGSQFQPSA
IEMLDGQTSPPQLLTEADLISLMEKHGIGTDATHADHIETIKSRMYVGLTADQRFLPGEL
GMGLVEGYNSMGYEMSKPHLRAELEADLKLVSEGRKDKQSVLRHHIHKYKTVFVESVKKA
KRLDEALSIYLGAAQEFSESEQQDMEMPLPVRKCPQCGRDMVLRRRKEGNGKYLSCVGYP
ECKCSVWFPDTVLEVNRDESVCPTCQPRPVHMLKLKFRRGSLPPMMPLEFVGCIGGCDET
LREVLNLKYLRMGGGGVAGGVGGRGGAGGGRGVGAAGGGRGGAGGGRGVGGRGGAGGGRG
VGAAGGGRGGEGRGDTATNQPRPRPAPRPDPLSPQTPNPPSSSWPTPPSPXPQAPPPDPR
GGDVTVCNCGSEAVLLTVRKDGPNQGRRFYKCSSGGCNFFLWNDQPDTNVYPPGPQGAPR
SRPHQPPRTSVGEVVCNCSEPAVQKTVQKEGPNRGRVFHTCGKPRDQQCGFFLWADENIP
PPGSGSGGGDWGKRGGDWGGRAPPTTKPPATRKPRTCGICHMPGHTRVTCPQR
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgctgatacatcatctgactcgggctctgttcacatccggacgaccgttaccgttacgg
atccaggtccacagggggttgagcgtcaccggacagaagaggacggactccccgggagac
atgatccggaggactccgatcaaacgggttctctgtgtggcggagaagaatgacgcggcc
aaaggcatcgcggagatcatgtctgacggcagagcgaggaggagggaggggctgtccgtc
tataataaactctatgagtatgaatacaacctgtttggaaggaatgtggcggtgtgtatg
acgtcagtttcaggtcatctgttgggtctggagttcaaggctcagttccagaaatggcac
agctgtaatcctgtcctgctgtttgatgctgaggtggagaagtattgtcctgagaacttt
gttcagatcaagcggaccctagagagagaggtgagtcagtgccaggcgcttgtcatctgg
acagattgtgacagangaggagagaacatcggctttgaggtgatagacgtctgcaaagca
gtcaagcccggtgtgcaggtgtttcgtgctcggttctctgagatcactcccaactctatc
aggagagcatgtgacacgttaacggaaccagacggtaacgtcagtgatgctgtggacgtc
cgtcaggagctggactctccggatagtcagttcaaaccatccaggcagttcatacagcat
atctacaagattcagctagtcctccatgaggtagaggaggaatcagtagagttcagctgg
aagaggaacagactgttcaaccacacagcctgtctagtcatctaccagatctgtctggag
gatcccatagcaaccgtcacctcggtaaccagtaaacccaaaagcaagtggaggcctctg
cccctggacacagtggaaatggagaagctggtttccaggaagttgagaatcggcgccaaa
gagaccatgaagatcgctgagaaactatacacacaggggttcatcagttatccgcgtaca
gagaccaacctgttccctaaggacctggccctgggccccctggtggagcatcagacacac
agcccctcctggggggccttcgctaggggggtgatggagcagccagggggacccaaccca
cggcagggcaccaagacagatcaggctcatccccctatacaccccatcaagtacaccaac
acactacagggcaacgagcagcgtgtgtatgagttcattgtgcgtcacttcctggcgtgc
gtatcccttgatgctgtggggcaggaaacggtggtcgaggtggaaatggctcacgagagg
ttctccgcaaacggcctcatgatcatcaggaggaactacctggacgtgtacccctacgac
cgctggagcactaaggtgatcccagtgtatgagcagggtagccagttccagccatcagcg
atagagatgctggatggccagacctctcctcctcaactcctcacggaggcagacctcata
tcactgatggagaaacatggcattggtacggatgccacccatgcagatcacattgagacc
ataaagagccgtatgtacgtgggactaacagctgatcagaggtttctaccaggagaactg
gggatgggactggtggagggttataactccatggggtatgagatgtctaagccacacctg
cgggcggagctggaggcggacctgaagctggtatcggaggggaggaaggacaaacagagc
gtgttgagacaccacattcacaaatacaagacggtcttcgtagagtctgttaagaaagcc
aagaggttggacgaggctctgtctatctatctgggcgcggcccaggagttcagcgaatca
gagcagcaggatatggaaatgcccctcccagtcaggaaatgtcctcagtgtgggcgggac
atggtgctgcggaggaggaaggaggggaacgggaagtacctgtcctgcgttggttaccca
gaatgcaagtgttccgtgtggtttccggacacggtgttagaggtcaacagagacgagtct
gtctgtcccacctgtcagccccgccccgttcacatgttaaagttgaagttccgacgaggc
agcctccctcccatgatgccgctggagtttgtgggctgcatcggagggtgtgacgagaca
ctgagggaggtactcaacctcaaatacctcagaatgggtggagggggcgtggcgggagga
gtaggaggaagagggggagctgggggaggaagaggagtaggagcagctgggggaggaaga
ggaggagctgggggaggaagaggagtaggaggaagagggggagctgggggaggaagagga
gtaggagcagctgggggaggaagaggaggagaaggaaggggagacactgcaaccaatcag
ccgagacctcgcccagcccccagaccggaccccctgtctccccaaacccccaaccccccc
tcctcgtcctggcccaccccaccctcgccttgaccccaggccccaccccctgaccccaga
ggtggtgacgtcacagtgtgtaactgtgggtcggaggcggtcctcctcaccgtgaggaaa
gacggtcctaaccagggcagacggttctataagtgttcctcaggaggctgtaacttcttc
ctgtggaacgaccagcccgacactaacgtttaccctccaggcccccagggggcgccacgc
agcaggccacaccagccccccaggacctccgtgggggaggtggtttgtaactgcagtgag
ccagcggttcagaagacagtgcagaaggaaggacctaatagaggaagagtgttccatacc
tgtgggaagcccagagatcaacagtgtggattcttcctctgggctgacgagaacatccca
ccaccaggttcaggttctggagggggagactgggggaagaggggaggagactggggagga
agagccccccccaccaccaaaccccccgctaccaggaagccccgtacctgtggcatctgt
cacatgcctggacacacacgtgtcacctgccctcagcgctga
DBGET
integrated database retrieval system
