Oncorhynchus keta (chum salmon): 127930272
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Entry
127930272 CDS
T09424
Symbol
zgc:86896
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04144
Endocytosis
oke04517
IgSF CAM signaling
oke04530
Tight junction
oke04810
Regulation of actin cytoskeleton
oke05100
Bacterial invasion of epithelial cells
oke05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
127930272 (zgc:86896)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127930272 (zgc:86896)
09144 Cellular community - eukaryotes
04530 Tight junction
127930272 (zgc:86896)
09142 Cell motility
04810 Regulation of actin cytoskeleton
127930272 (zgc:86896)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127930272 (zgc:86896)
05100 Bacterial invasion of epithelial cells
127930272 (zgc:86896)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
127930272 (zgc:86896)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oke04812
]
127930272 (zgc:86896)
Membrane trafficking [BR:
oke04131
]
Others
Actin-binding proteins
Arp2/3 complex
127930272 (zgc:86896)
Cytoskeleton proteins [BR:
oke04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
127930272 (zgc:86896)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR5
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_Aladin
Beta-prop_WDR75_1st
WDR55
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
EIF3I
Rax2
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
127930272
NCBI-ProteinID:
XP_052375791
LinkDB
All DBs
Position
5:37228939..37243848
Genome browser
AA seq
357 aa
AA seq
DB search
MSLYSFGLEPLSCHAWNKDRTQIAVSPNSSVVIIYEKKGNEWAKIHELTEHSGRITGIDW
APDSNRIVTCASDRNAYVWTLKDKVWKPTLVLVRINRAATFVKWSPLENKFALGSGARLI
SVCYFEKENDWWLSKHIKKSIRSTVMCLDWHPNNILLAAGSSDFHCRIFSAYIKEIEDKP
GPTAWGAKMPFGEMLLETKDCGGWVHSVSFSPSGDHLAWVAHNSSISVADATQGKEVTQL
TTDRLPLVSVLYVSPTEMVAAGHDCCPFQFSYKGPGSLKFVKKLDIPKQTSRGSMSAMQH
FRNLDKKATDDDESNELGCLHQNSITQLCIVSGTKAHVDKYSSVGLDGAMVLWDFKH
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtacagctttgggttggagcctctctcctgtcatgcctggaataaggacagg
acacagattgctgtcagccccaacagcagtgtggtgatcatctatgaaaagaaggggaac
gagtgggccaagatccacgagctgactgagcacagtggacgaatcacaggcatcgactgg
gctccggattcgaaccgcatcgtgacgtgtgcgtcagaccgtaatgcgtacgtgtggacc
ctgaaggacaaggtgtggaagcccactctggtgttggtgaggatcaaccgggctgctact
ttcgtcaagtggtcccctctggagaataagtttgccctgggcagcggagctcgcctcatc
tctgtctgctacttcgagaaggagaacgactggtggctcagtaagcacataaagaagagc
atccggtccacggtgatgtgtctggactggcaccccaacaacatcctgttggctgcagga
tcctctgacttccactgcaggatcttctctgcctacatcaaggaaatcgaggacaagcca
ggcccgacagcttggggggctaagatgccatttggggagatgctgctggagaccaaggac
tgtggaggttgggtacacagtgtctccttctcccccagcggagaccacctggcctgggtc
gctcacaacagcagcatcagtgtggccgacgccacccaggggaaagaggtgactcagctg
acaacggaccgtctccctctagtgagcgtgctctatgtgagccccacagagatggttgcc
gcgggccatgactgctgtccgtttcagttctcctataagggcccaggcagtctgaagttt
gttaagaagctggacatccccaagcagacctctaggggcagcatgtccgccatgcaacac
ttccgcaatctggataagaaggctactgacgacgacgagagcaacgagctgggctgcctg
caccagaacagcatcactcagctgtgtatcgtgtcaggaactaaggcccacgtggacaag
tacagcagtgtgggtctggacggagctatggtcctctgggacttcaagcactga
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