Oncorhynchus keta (chum salmon): 127930275
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Entry
127930275 CDS
T09424
Symbol
wipi1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
KO
K17908
autophagy-related protein 18
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04136
Autophagy - other
oke04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127930275 (wipi1)
04136 Autophagy - other
127930275 (wipi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
127930275 (wipi1)
03029 Mitochondrial biogenesis [BR:
oke03029
]
127930275 (wipi1)
Membrane trafficking [BR:
oke04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
127930275 (wipi1)
Mitochondrial biogenesis [BR:
oke03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
127930275 (wipi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RSE1_2nd
ANAPC4_WD40
Beta-prop_NWD2_C
Beta-prop_HPS5
WDR55
Beta-prop_EML
Beta-prop_IFT140_1st
BCAS3_WD40
Beta-prop_Vps41
EIF3I
Beta-prop_WDR35_TULP_N
RMC1_N
Motif
Other DBs
NCBI-GeneID:
127930275
NCBI-ProteinID:
XP_052375794
LinkDB
All DBs
Position
5:37250458..37292776
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AA seq
454 aa
AA seq
DB search
METGEGADGPSGPGEPGAGPGTELTGLGCASFNQDSTSLAVGTKTGYKLFTVTSVDKLDC
IYESETPDVYIVERLFSSSLVVVVSLSIPRRMNVYHFKKGTEICNYSYSNNILSVRLNRQ
RLVVCLEESVYIHNIKDMKLLKTLLNTPSNPSGLCALSINHSNSYLVYPGSSTIGEIIVY
DANNLSTLTMIPAHDSPLAALTFNSSGTKLASASERGTVIRVFSIPEGQRLFEFRRGMKR
YVNISSLSFSPDAQFLCASSNTETVHIFKLEQHGPSGEEECPTWGSYVGKMFSAASSYLP
AQVSGVMSQERAFATVRLLVAGQRNVCTLATIQKLPRLLVASSDGQLFIYNVDPQDGGEC
FLSQKHRLFGEDEDKEEGVESEGSEVTVPVQACPSYAATVAIPATGPVTTTLTGYSEDGG
AKKGEVIPEHEFAAGPVCLDDENEFPPVSNQQLS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggagacgggagagggagctgacggtcctagcggaccgggtgaaccgggagccgggccg
gggacggagctgacggggcttggctgcgcctctttcaaccaagactccacgtcattggca
gtgggaaccaagacaggctataagctgttcactgtgacctcagtggacaaactggactgc
atctacgagagcgagaccccagacgtgtacatcgtggagcggttgttctccagcagtctg
gtggtggtggtcagtctctccatccccagacggatgaacgtctaccacttcaagaaggga
acggagatctgcaactacagctacagtaacaacatcctctctgtcagactcaacagacag
aggctggtggtgtgtctggaggagtcagtgtacatccacaacatcaaagacatgaagctg
ctgaagacccttctcaacacgccctccaacccctcaggtctgtgtgctctgtccatcaac
cattccaactcatacctggtctacccaggcagctccaccatcggagagatcatagtttac
gatgccaacaacctgagcactctcacaatgatcccggcccatgacagtcccctggctgct
ctcacctttaactcgtcaggcaccaagctggccagcgcctcagagaggggtactgtaatc
cgtgtattctccatcccagagggacagcggctgtttgagttccgcagagggatgaagagg
tacgtcaatatcagttccctgtccttcagtcctgacgcccagttcctctgtgcctccagc
aacactgagaccgtacacatcttcaaactggaacagcacggacccagtggagaggaggag
tgtcctacctggggatcctacgtagggaagatgttctctgcagccagcagctacctccca
gcccaggtgtctggcgtgatgagtcaggaaagagccttcgccactgtacgcctcctagtg
gccgggcagaggaacgtctgtaccctcgccacgatccagaagcttcctcgtctgctggtg
gcctcctccgacggacagctgttcatctataacgtcgacccccaggatggaggagagtgc
tttctgtctcagaaacacagattgtttggtgaggatgaggacaaggaggaaggggtggag
tcagaagggtcagaggtcacggtgcccgtccaggcatgtccatcatacgccgccactgtt
gccataccagccaccggtccagtcactaccacactcacaggttactctgaggatggtggg
gctaagaagggcgaggtgatcccagaacatgagtttgctgctggtcccgtctgtctggat
gatgagaatgagtttcctccagtgagcaaccagcaactctcctag
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