Oncorhynchus keta (chum salmon): 127930318
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Entry
127930318 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: NLR family CARD domain-containing protein 3-like
Organism
oke
Oncorhynchus keta (chum salmon)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
PRY
NOD2_WH
LRR_6
SPRY
LRR_4
PYRIN
Motif
Other DBs
NCBI-GeneID:
127930318
NCBI-ProteinID:
XP_052375885
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All DBs
Position
5:38692381..38705390
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AA seq
1107 aa
AA seq
DB search
MSQLHNHVNSLNHLTVSMCLCQRSKMSISGEREEGGPASKMRLSGEHDTTAKSPIKQERP
ASPVPSCVSMKSERSMGHPILFREADFSTGQRNQEERSEILRGQSSQSHQTDLAPIFSLL
EENIITFVKNELKMFKRILSPELPEGFESQKQDKEVDAEDEKHESSAREGALKITLHVLR
KMNQKELADTLEKNELAVICQRELKSNLKKKFQCVFEGIAKQGNPTLLNKIYTELYITEG
GTGEVNNEHELRQIETTTRKQARPETAIKCNDIFKPLTGQDKPIRTVLTKGVAGIGKTVS
VQKFILDWAEGKANQDVQFVFSFPFRELNLMKEDKHTLIELLNHFSMENKESRISNYDKY
NVLFIFDGLDECRLPLDFQNNKICWDVTESTSVDVLLTNLIKGNLLPSALLWITTRPAAA
NQIPSGCVDQVTEVRGFNDPQKEEYFRKRFSDEDLASSIISHIKTSRSLHIMCHIPVFCW
ISATVLEHMLKHKREEMPKTLTEMYTHLVVFHTKQKNEKYLGKEETGPHWNKESILSLGK
LAFQQLVKGNLIFYEEDLKEAGIDVNEASVYSGLCTQLFKEECGLYQDKVYCFVHLSIQE
FLAAVYVFLSFSNNNENLMAEPQSTSRNFYVRIRQKIKVTVYKSAVDEALQSETGNLDLF
LRFLLGLSLQSNQKHLRGLLTKTRSSSQSHEKTVKYIKEKIRENXSPERSINLFHCLNEL
NDHSLVEEIQRYLRSGSVSEAKLSPSQWSALVFVLLSSEKELDVFDLKKYSRSEEGLLRL
LPVVKVSRAALLSGCGVTDKGCASLASALKSNPSHLRELDLSNNDLKDSGVKLLSDGLGN
PHCKLETLRLSGCLVTEEGCASLVSALRSNPSHLRELDLSYNHPGDSGVRLLSAGLEDPN
YRLEKLNVEHGGEIRMKPGLRKYVCDLTLDPNTVNRLLSLSEENRKVTCRRQERRYPDHT
ERFEDCEQVLCKEGLTGRCYWEVERSGGGAVMGVTYKGIKRRGGGIDCGIGYNDKSWSLV
CSDNSYKACHNNNHTTIDVPSSSSHRVGVYLDWPAGTLSFYRVSSDTLTHLYTFYTTFTE
PLYPGFRVYDVTSSVSLCQVVPVSNTT
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaactccataatcatgtgaattcattaaatcatctgactgtttcgatgtgtctt
tgtcagcggtctaaaatgagtatctctggggagagagaggaggggggccctgcctctaaa
atgagactctctggggaacatgacaccacagctaaaagtccaatcaagcaggagagacca
gcctcccctgtacccagctgtgtgtccatgaagagtgagcggtctatgggtcatcctata
ctgtttagagaggcagacttttctactggacaaagaaaccaagaggagaggtcagagatt
ctcaggggtcagtcttcccagagtcatcaaacagacctggcccccatattcagtttgctt
gaagagaatattatcacatttgtaaagaacgagctgaagatgttcaagaggattcttagt
ccagaactcccagaaggctttgagagtcagaagcaggataaggaagtggatgctgaagat
gagaagcatgagagcagtgccagagagggggctctgaagatcacactgcacgtcctgagg
aaaatgaaccagaaggagcttgctgacacactggagaaaaatgaacttgctgtgatttgc
caacgtgaactcaaatctaatctaaagaagaagtttcaatgtgtatttgaggggatcgct
aaacaaggaaacccaacacttctcaataagatctacacagagctctacatcacagagggt
ggaacaggagaggtcaataatgaacatgagctgagacagattgagacaacaaccaggaaa
caagcaagaccagagactgcaatcaaatgtaatgacatcttcaaacccttaactggacaa
gacaaacctatcagaactgtgctgacaaagggagtcgctggcattggaaaaacagtctct
gtgcagaagttcattctggactgggctgaaggaaaagcaaatcaggatgtccaatttgtt
ttttcattcccttttcgggagctgaatttgatgaaagaggacaaacacactttgattgaa
cttctcaatcacttctcaatggaaaacaaagaatcaagaatctccaactacgacaagtac
aacgttctgttcatctttgatggtctggatgagtgccgactgcccctagacttccagaac
aacaagatctgttgggacgtcacagagtcaacctcagtggatgttctgctgacaaatctc
atcaagggaaacctgcttccctctgctctcctctggataactacccgacctgcagcagcc
aatcagatcccttcagggtgtgttgaccaggtgacagaggtacgagggttcaatgaccca
cagaaggaggagtacttcaggaagagattcagtgatgaggacctggccagcagtatcatc
tcacacataaagacatcaaggagcctccacatcatgtgccacattccagtcttctgttgg
atttctgcaacagtccttgaacacatgctgaagcataagagagaagagatgcccaagact
ctgactgagatgtacacacaccttgtggtgtttcataccaaacagaagaatgaaaagtat
cttgggaaagaagagacaggtccacactggaataaagagagcattctgtcactgggaaaa
ctggcttttcaacagcttgtgaagggcaatctgattttctatgaagaagacctgaaagag
gctggcattgatgtcaatgaagcctcagtgtactcaggattgtgcacacagctctttaaa
gaggaatgtgggctgtaccaggacaaggtgtactgcttcgtgcatctgagcattcaggag
tttctggctgctgtatatgtgttcctctcattcagcaacaacaatgaaaatctaatggcc
gaacctcaatcaacatccaggaacttttatgtgaggatcagacagaaaattaaagtcacc
gtctacaagagtgctgtggatgaagccttacaaagtgagacgggaaacctggaccttttc
ctccgcttccttctgggcctctcactgcagtccaatcagaagcacttacgaggtctactg
acaaagacaagaagcagctcacagagccatgaaaaaacagtcaagtacatcaaggagaag
atcagggagaatncctctccagagaggagcatcaatctgttccactgtctgaatgaactg
aatgaccattctctagtggaggagatccaacgctacctgagatcaggaagtgtctcagaa
gccaaactctcaccttcacagtggtcagctctggtctttgtgttgctgtcttcagaaaag
gagctggatgtgtttgacctgaagaaatactccagatcagaggaaggtcttctgaggcta
ctgccagtggtcaaagtctccagagctgctctgctgtcaggctgtggagtcacggacaaa
ggctgtgcttctctggcctctgctctgaagtcaaacccctcacacctgagagagctggat
ctgagtaacaatgacctgaaggattcaggagtgaagctgctctctgacggactggggaat
ccccactgtaaactggagactctgaggctgtcaggctgtctagtcacagaggaaggctgt
gcttctctggtctcagctctgaggtcaaacccctcacatctgagagaactggacctgagc
tacaatcacccaggagactcaggagtcagactgctctctgctggactggaggatccaaac
tacagactggagaaactcaatgtggaacatggtggagagatcagaatgaaacctggcctt
agaaaatatgtctgtgatctcacactggacccaaacacagtaaacagactcctctctctg
tctgaggagaacagaaaggtgacatgtaggagacaggagcggcggtatcctgatcacaca
gagagatttgaggactgtgaacaggtgctgtgtaaagagggtctgactgggcgctgttac
tgggaggtagagaggagtgggggaggggctgttatgggagtgacatataaaggaatcaaa
aggagaggagggggcattgactgtgggattggatacaatgacaagtcctggagtctggtc
tgctctgacaacagttacaaggcctgtcacaataataatcacactaccatagacgtcccg
tcctccagctcccacagagtaggagtgtatctggactggccagccggcactctgtccttc
tacagagtctcctctgacacactgacccacctgtacacattctacaccacattcactgag
cccctctatccagggtttagggtttatgatgttacctcctccgtgtccctttgtcaagtg
gttcctgtgtcaaacacaacatga
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