KEGG   Oncorhynchus kisutch (coho salmon): 109864363
Entry
109864363         CDS       T09179                                 
Name
(RefSeq) transportin-3-like isoform X1
  KO
K15436  transportin-3
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03013  Nucleocytoplasmic transport
oki03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109864363
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    109864363
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:oki03016]
    109864363
Transfer RNA biogenesis [BR:oki03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    109864363
SSDB
Motif
Pfam: TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_3rd TPR_TNPO3_IPO13_2nd Xpo1 IBN_N
Other DBs
NCBI-GeneID: 109864363
NCBI-ProteinID: XP_031653169
Ensembl: ENSOKIG00005012107
LinkDB
Position
LG19:complement(15803805..15821041)
AA seq 927 aa
MEKPTVALVYQAVQALYHDPDPAGKERASVWLGELQRSMYAWELADQLLQLKQDVESCYF
AAQTMKMKIQMSFFELPPETHIALRDSLLSHIQSLKDLSPIIVTQLALAIADLALQMASW
KGCVHTLIEKYSNDVSSMTFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSSTVVT
LLMTCVEKSGSNEKMLIKVFRCLGSWFNLGVLDSNFMANNQLLMVLFQVLQRDETSTNLH
EAASDCVCSALYAIENVDTHMPLAQQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFTEL
CETFLETTVRSPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGENLYKTNDPALH
GIFRPYIQRLLHGLARHCQLDPDHEGIPEDTDDFGEFRMRVSDLVKDVIFLVGSMECFSQ
LYSTLKEGNPPWEVTEAVLFIMAAIAKSVDPENNPTLTEVLEQVVLLPETVHIAVRYTSI
ELVGEMSEVVDRNPRFLAPLYVTDPVLNYLMKGLREKTLASVAAKAIHNICSVCRDHMAQ
HFQGLLDIARALDSFALTTEAAVGLLKGTALVLARLPLEKIAECLSDLCAVQVMALKKLL
SQDPRNGKAADPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNTHQADN
RIVERCCRCLRFAVRCVGKGSASLLQPLVTQMVSVYQVYPHSCFLYLGSILVDEYGMEEG
CRQGLLDMLQALCMPTFQLLEQTNGLRNHPDTVDDLFRLATRFVQRSPITLLSSGIIVHI
IQCAIAATTLDHRDANCSVMKFVRDLIHTGVSNDHEDDFELRKQLIGQAMGQHGQQLVTQ
LMHTCCFCLPPYTLPDVAEVLWEIMVFDRPTFCRWLENALKGLPKETSGGAVTVTHKQLT
DFHKQVTSAEECKQVCWAIREFTRLFR
NT seq 2784 nt   +upstreamnt  +downstreamnt
atggagaaaccgacagtcgcacttgtgtatcaagctgttcaggctctttatcatgatccg
gaccccgccggcaaagagcgagcctctgtgtggctgggggagctacagagatcgatgtac
gcgtgggagttggcagaccaactcctccagctgaaacaggacgtggaatcttgttacttt
gccgcccagaccatgaagatgaagatccagatgtcgttctttgagcttcccccagagacc
catatcgccctccgagactccctgctctcacacatacagagcctcaaagacctctccccc
atcatcgtcacccagctcgctctggccattgcagacctcgccctacagatggcctcctgg
aagggctgtgtccacaccctcattgaaaagtatagcaatgacgtcagctccatgacgttc
ctgatagagatccttacagtgctccccgaggaggtccacagccgctccctacgcatcgga
gccaatcgcaggacagagatcatcgaggacctggcctattactccagtactgtggtcacc
ctactgatgacgtgtgtggagaagtctggcagcaatgagaaaatgctgatcaaggtgttc
cgctgtctgggcagctggttcaacctgggagtcctggacagcaactttatggccaacaac
cagctcctcatggtccttttccaagtgctgcagagagacgagacgtccactaacctgcac
gaggccgcgtccgactgtgtgtgttcagcgctgtacgccatcgagaacgtggacacgcac
atgcccctggcccagcagctcttccagggcgtcctcacgctggagacagcctaccacatg
gccgtggcgcgggaggacctcgacaaagtgttgaattactgtaggatcttcactgagttg
tgtgagacgtttctggagacgacagtcaggagtccaggccagggcatgggagacctgcgg
acgcttgagctactgctcatctgtgcaggacaccctcaatatgaggtcgtggagatctcc
tttaacttctggtatcgtctgggagagaacctgtataagaccaacgaccctgccctccac
ggcatcttcagaccctatatccagagactgctgcacggcctggcccgccactgccaacta
gaccccgaccacgagggcatcccagaagatactgatgactttggggagttcaggatgagg
gtgtctgatcttgtgaaggatgtcattttccttgtgggctccatggaatgtttctcccag
ttgtactccactctaaaagaagggaaccctccctgggaggtgactgaggcggttctcttc
atcatggccgccatcgccaagagtgtagaccctgagaacaaccccaccctgacagaggtg
ttagagcaggtggtgctgctgccagagactgtccatatcgccgtgcgctacaccagcatt
gagctggtgggggagatgagcgaggtcgttgaccgcaacccgcggttcctagccccgctc
tatgtcacagaccccgtgctgaactacctgatgaagggcctgagggagaagaccctggct
tccgtggcggccaaggccatccataacatctgctctgtgtgtcgggaccacatggcccag
cacttccagggcctgctggacatcgcccgtgccctcgactccttcgccctgacgaccgaa
gccgccgtaggcctcctcaaaggtacagccctggtcctggctcgcctgcccctggagaag
atcgctgagtgtttgagtgacctgtgtgctgtgcaggtcatggccctcaaaaagcttctc
tctcaggaccccaggaatgggaaagctgctgaccccactgtctggctggacagactagcc
gtcatcttccgacacacaaaccccatcgtagagaatggacagacacacccatgtcagaaa
gttatccaggagatctggccggtcctatcagagactctgaacacacaccaggctgataac
cgcatcgtggagcgctgttgtcgctgcctgcggttcgctgtgcgctgcgtgggcaaaggc
tctgcctctctactacagccactcgtcacacagatggtcagtgtgtatcaggtgtatccc
cactcctgcttcctgtatctgggcagcatcctggtggatgagtacggcatggaggagggc
tgcagacaaggtctactggacatgctgcaggctctttgtatgcccaccttccagctattg
gagcagaccaacggcctccgtaaccacccagacacagtagatgacctcttcagactcgct
accaggtttgtccagcgtagtcccatcaccctgctcagcagtggcatcatcgtccacatc
atccagtgtgccatcgcggccacgacactggaccaccgggatgccaactgcagcgtcatg
aagtttgtcagagacctcatccacacgggcgtcagcaacgaccacgaggatgactttgag
ctgcggaagcagctaataggccaggccatggggcagcacgggcagcagttggtcacccag
ctcatgcacacatgctgcttctgcctgccaccttacacactccccgatgtggctgaggtg
ctctgggagatcatggtgtttgacaggccgacgttctgccgctggctggagaatgcgctg
aaggggcttcctaaagagacgtcaggcggggcggtgacagtcacacacaaacagctcaca
gacttccacaagcaggtcaccagtgcagaggagtgtaagcaggtgtgctgggctatccgg
gagttcaccagattgttccgatag

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