Oncorhynchus kisutch (coho salmon): 109864376
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Entry
109864376 CDS
T09179
Name
(RefSeq) ATP-dependent DNA helicase Q1 isoform X2
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oki03400
]
109864376
Enzymes [BR:
oki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
109864376
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
109864376
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
RQC
ResIII
wHTH-PRTase_assc
P22_Tail-4
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
109864376
NCBI-ProteinID:
XP_020307710
Ensembl:
ENSOKIG00005012959
LinkDB
All DBs
Position
LG19:15976038..15993164
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AA seq
633 aa
AA seq
DB search
MDSDNADDVQAGLDSVEAELEVVKLQIAELLEKQASLTSKRKQLLRRLEEPCDSTQASGS
GPAMTKQELLRYENDDFSWSTELEQNLKDVFQLSTFRPLQLKAINLSMSGKDLFLVMPTG
RGKSLCYQLPAVCSEGFTLVVTPLVSLMEDQLMYLKSIDVEAVSLNASSSKEHAKMVLAE
MTDSKAPFKLLYVTPEKIAKSKLLMSRLEKAYNAGRLSRIAVDEVHCCSQWGHDFRPDYK
LLGILKRQFPKVPLLGLTATATGSVLKDCQKILCVPEPITLTASFNRTNLYYEVRLKDSN
SDDSVSDISALIKERYKDQSGIVYVFSQKDAETVSADLQGKGVNASPYHANMNPEDKSQV
HRKWATNKIQVVVATVAFGMGIDKADVRFVIHHTISKSIENYYQESGRAGRDDKPADCIV
YFGFNDIFRISTMVVMENVGQQKLLTMVDYCQNVDRCRRSVIAVHFDEVWDDEGCNEMCD
VCRHGNDYITVDITQHAKDVVQIVELAGSLDEKLTPLKVTEAWMGKGPAKRRKMIQTTTL
SRLEVEAIITSLLLQGYLSEDFSFTPYTTYFYLKLGGKAPLLKNQSHSITMKMRRTGLDA
NTVKVSQVKTKEGKRSGDNAANSPVTKKVKRDL
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgacaatgccgacgacgtgcaggcagggctggactctgtggaggctgagctg
gaggtggtgaagctgcagatagctgagctgctggagaagcaggctagcctgacctccaag
aggaaacagctgctccgcaggctggaagagccatgtgactccacccaggcctctggatct
ggacctgcaatgaccaagcaggagctgctgcgctatgagaatgatgatttctcgtggtca
acagagctggagcagaatctgaaggatgtcttccagctctctacgttccgtcctctccag
ctgaaggccatcaaccttagtatgtctggtaaagacctctttctagtgatgcccactgga
cgagggaaaagcctctgctatcagctacctgcagtctgctctgagggtttcactctggta
gtaactcctctagtgtctctgatggaggatcagctcatgtacttaaagtccatcgacgtt
gaagccgtctctctcaacgcatccagcagtaaggaacatgctaaaatggtcctagcggag
atgacggactccaaagcgcctttcaagctgctgtatgtgactccagagaagatagcgaag
agcaagctgctgatgtcgaggctggagaaggcctacaatgcaggcaggcttagccgtatt
gctgtggacgaagtgcactgctgcagccagtggggacacgacttcagacctgactacaag
ctcctggggatcctgaagaggcaattcccaaaggttccgttgctagggctgacggccacg
gcaaccggcagtgttctaaaggactgtcagaagatcctgtgtgtccctgagccaatcaca
ctcaccgcctccttcaaccgcaccaacctctactacgaggtacgccttaaagactcgaac
agtgatgattcagtcagtgacatctccgcactgatcaaggagagatacaaggaccagtca
gggatagtgtacgtgttttcccagaaggacgcagagacggtgtcagcagacctacagggg
aaaggcgtcaatgcatctccataccacgctaacatgaatccagaggacaagtcacaggtt
catcgcaaatgggccaccaacaagatccaggtggtggtagctactgtggcgttcgggatg
gggatcgacaaggctgacgtcagatttgtcatccatcacaccatcagcaagtccatagag
aactactatcaggagagcggacgagcaggcagagatgataagccggctgactgcattgtg
tactttggcttcaacgacatcttcaggatcagcaccatggttgtcatggagaacgtagga
caacagaagctgctgaccatggtcgactactgtcagaatgtggacaggtgtcggcgctca
gtgatcgctgttcactttgatgaggtttgggacgatgaaggatgcaacgagatgtgtgac
gtctgtcgccatggcaatgactacatcacggtggacatcacgcagcatgctaaagatgta
gtccagattgtggagctggcgggctctctggacgagaaactgacccccctgaaggtgacc
gaggcgtggatggggaagggtccggccaaacgcaggaagatgatccagaccaccaccctg
tctcgcctggaggtggaggccatcatcacaagcctactgctgcagggctacctcagtgaa
gacttcagtttcactccatacaccacctacttctacctgaagctgggtggtaaggcacca
ctgctgaagaaccagagtcactccatcaccatgaagatgaggaggacaggcctggacgcc
aacacggtaaaagtgtcccaggtaaagaccaaagaaggaaagagatctggtgacaatgct
gcaaactcccctgtcaccaagaaagtcaagagagacctctag
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