Oncorhynchus kisutch (coho salmon): 109864401
Help
Entry
109864401 CDS
T09179
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33 isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oki01001
]
109864401
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109864401
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109864401
Protein kinases [BR:
oki01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
109864401
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109864401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_5
PHD-1st_NSD
PML_CC
DUF1351
Trm112p
PRANC
ParB
DUF5054
Motif
Other DBs
NCBI-GeneID:
109864401
NCBI-ProteinID:
XP_020307766
Ensembl:
ENSOKIG00005032206
LinkDB
All DBs
Position
LG19:18619407..18631880
Genome browser
AA seq
1226 aa
AA seq
DB search
MDESPEAAVDNDDLVIIVENEAESLPAEEERAKQLGGSLGLMDTCPVCKLNFHNREPKLL
PCLHSFCNKCLPPPSRNLVNTEQRRDPQLQADSSKPREILNVIRCPVCRQECWEVEVLDN
FFVKDSVEVPSSTVEKTSQVCMSCDDNTEATGFCVECVEFLCVTCIEAHQRVKFTRDHTI
RQKEEMSPEAVGASTQKPVFCDIHKQEPLKLFCETCDRLTCRDCQLLKHKDHNYQFLEDA
YRNHRQHLENMTHQLQEKRKAIEEVSNCINNGLQQVDENRKSVTNEIKKSICNLIMEINR
KGKILVNQLETLTKDHEVGLKKQQEDVSHLTRHLDHVINFTKWATASHSGTALLYCKRLI
LCQIHYLMRANCNASIVPQSSVRFQCRSGFWASNVDLGSLAVERIPGRQPSSMQQGFPPG
HPSQPGPGPRGEGPPGAFPPGSTAHQRGSTLAQLQLQVEKLAQHPNRAGQPPPNHWSWYQ
QGLKLPGPGPGGPPPQRPHQGGSPSQGPPNMVQIQQPGRSYGPPGPQTHPNPRSPTSMLQ
NAGFPPQSLRDLIHNSSFPPKPMDVLQGTSRYSHAPPNTGPISTQASIHQRNMMEAAQLR
RSDPSGSSSLSMPNPRASYAPSLATAFPDRHAQGRQNSPMSKSSSSEANIGSASWKRTEP
HAAAPPSAKRRRRSSPGPIIVIKDEPEDDDEVSFVQSSVGASASLPDSSTGIQPKPQQLS
LPAPMLEPQLEPEPQLEPEPQLEPEAWPGPPLEPEAWPEPQLEPEPQLEPEPQLEPEPRL
EPEARPEPQLEPEARPEPQLEPEARPEPQLEPEARPQPQLEPEARPQPQLEPEAQPETQV
ELEADPQPDREKAPGVPEDDPNEDWCAVCQNGGELLCCDRCPKVFHLNCHIPSLRESPSG
EWFCSFCRDLASPEMEYNPDSQGESPAMKEEPGSERFPPVDKRKCERLLLCIYCNEFSTD
FQEPASPLSIPEYKELIETPMDLSIVKSRLESKESPRYCSAEEFVKDVRLIFRNCAKYYQ
ADTEVGGAGLSLEEYFEEQLKLLYQDRSFSGGREEGMIPPVEDEMEEGMEDDGMAPNEGD
MPPVEDDLTPVEEGMPSMEKEGTEEAPVEGGMEEEGIPPLEESMEEEGEEASPVKGDSPP
SDATEPADPSTRGASSPNLPSKDAPQPLSSTPDNPPCEEAPQPLSDTPDNPPDTSPADSQ
DTSPAAGLAIENEGTTEEMRDEAEEE
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atggatgagagcccagaagctgctgtggacaacgatgaccttgttattattgtggaaaac
gaggcagagagcttgccagctgaagaggagagggcgaaacagctagggggtagcctcggt
ctcatggacacttgccctgtctgcaagttgaatttccataacagagagccgaaacttctg
ccatgcctccactctttctgcaataagtgtcttccacctccttcaaggaacttagtcaac
actgaacaacggcgcgacccgcaacttcaagcggacagctcgaaaccacgtgagatcctc
aatgtgatccgctgcccagtgtgtcgacaagagtgctgggaggtggaggtgctcgataac
ttctttgtgaaggactctgttgaggttcccagcagcacagtggagaagaccagtcaggtg
tgtatgagttgtgatgacaacacagaggccacggggttctgtgtggagtgtgtggagttc
ctgtgtgtgacatgtattgaggcccaccagcgagtcaagttcaccagggatcataccata
cggcagaaggaagagatgtccccagaggctgttggtgcatccacacagaagccagtgttt
tgtgacatccacaagcaggagcccctcaagctgttctgtgagacctgcgaccgtctcaca
tgcagagattgtcagctgctcaagcacaaagaccacaattaccagttccttgaggatgcc
tacagaaaccacaggcaacacctggaaaacatgacacatcagctacaggagaagaggaaa
gccatagaagaagtgtccaattgcatcaacaatggactccagcaagtcgatgaaaaccgc
aaatctgtcaccaatgagataaagaaatcaatttgcaacttgatcatggagatcaacaga
aagggaaaaatcttggtcaatcaacttgagacactgactaaggaccatgaggtcggactg
aagaaacaacaagaagatgtcagccacctgaccagacatctagatcacgtcatcaacttc
accaagtgggccacagccagtcacagtggcacagctctgctgtactgcaaaagactgatt
ctttgccaaatccattacctaatgagggccaactgtaacgcatccatcgtccctcagagc
tcagtccgcttccagtgtcgctccggtttctgggcctcaaatgtcgaccttgggtctttg
gcagtagagagaatccctggtcgtcagcccagttccatgcagcagggcttccctcctggc
caccccagccagcctggccccggccctagaggagagggccctcccggggccttccctcca
ggctccaccgcccaccagcgtgggagcaccctggcccagctccagctgcaggtagagaag
cttgctcagcaccccaacagggctggacagccccctcccaatcattggtcctggtaccag
cagggtctgaagctcccggggccaggtccagggggcccacctccacagaggccccaccag
gggggttctccatcacagggtccccccaacatggtccagatccagcagccaggccggagt
tacggaccccccggcccccaaacccatcccaaccccaggagccccacctctatgctgcaa
aacgcaggcttccctcctcagtctctaagggatctcatccacaactccagcttccctccc
aaaccaatggatgtgctacagggtacctcccgctactctcatgcacctcctaacacagga
cccatcagcactcaagcctctatacaccagcgtaacatgatggaagccgcacaactgagg
aggagtgaccccagtggatcttcatcattatccatgcccaaccccagagctagttatgct
ccgagcctagccactgccttcccagacagacatgcacaaggaagacagaattcccccatg
tccaaatcttcctcctctgaagccaacatagggtctgcttcctggaagcgtacagagcct
catgctgcggctcccccctcagctaagcggaggcgaaggtcgtcccccggaccaatcatc
gtcatcaaggacgaaccagaggacgatgacgaagtcagctttgtgcagtctagtgttgga
gcctcagccagcctgccagacagtagtacaggcatccagcccaagccccagcagctgtct
ctcccagcacccatgttggagccccagctagagccagagccccagctagagccagagccc
cagctagagccagaggcctggccagggcccccgctagagccagaggcctggccagagccc
cagctagagccagagccccagctagagccagagccccagctagagccagagccccggcta
gagccagaggcccggccagagccccagctagagccagaggcccggccagagccccagcta
gagccagaggcccggccagagccccagctagagccagaggcccgacctcagccccagcta
gagccagaggcccgacctcagccccagctagagccagaggcccagccagagacccaggta
gagctagaggctgacccccaaccagaccgagaaaaggccccaggtgtccctgaagacgac
ccgaatgaagactggtgcgccgtgtgtcagaatgggggagaactgctctgctgtgacaga
tgtcccaaagtcttccatctgaactgtcatataccttcacttagagagtctcccagtggt
gagtggttctgttcgttctgtcgtgacctggccagtcctgagatggagtataacccagat
agccagggagaatcaccagccatgaaggaagagccaggatcagagagattccctccagtt
gataagaggaaatgtgagagactgttgctctgcatctactgcaacgagttcagtacagat
ttccaggagcctgcctcaccgttgtcaatcccagagtataaggagctgattgagacacca
atggacctgtctatagtgaagagcaggctggagtctaaggagagcccacgttactgcagt
gctgaggagtttgtcaaggatgtcaggctcatattcaggaactgtgcaaagtattaccag
gcagacactgaggtgggaggtgcaggactgagcctggaggagtactttgaagagcagctc
aagctcctctaccaagacaggagcttctctgggggcagagaggagggaatgataccccct
gtggaggatgagatggaagaagggatggaagatgatgggatggctcctaacgaaggggat
atgcccccggtcgaggacgatctaacacctgttgaagaagggatgccttctatggagaaa
gaaggaacggaagaggctcctgtggaaggagggatggaggaagaagggatacctccatta
gaagagagcatggaagaggaaggggaagaggcttctccagtgaaaggagactcaccacct
tctgatgctacagaaccagcagatccatcaacaaggggtgcatcatcacccaaccttccc
agcaaggatgctcctcaacccctctcctcaaccccagacaaccctccctgcgaggaggcc
ccccaacccctctcagataccccagacaaccctcctgacaccagccctgctgactcccag
gacaccagccctgctgcaggcttagccatagaaaatgaggggacgactgaagaaatgcga
gacgaagcagaagaggaatga
DBGET
integrated database retrieval system
