Oncorhynchus kisutch (coho salmon): 109864411
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Entry
109864411 CDS
T09179
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109864411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
109864411
03036 Chromosome and associated proteins [BR:
oki03036
]
109864411
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109864411
Coactivators
SAGA/TFTC/STAGA complex
109864411
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
109864411
STAGA complex
109864411
TFTC complex
109864411
SAGA complex
109864411
SLIK complex
109864411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
CENP-S
TFIID-31kDa
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
109864411
NCBI-ProteinID:
XP_020307776
Ensembl:
ENSOKIG00005033072
LinkDB
All DBs
Position
LG19:complement(19164591..19221730)
Genome browser
AA seq
627 aa
AA seq
DB search
MAEERRPKQCTVVLPTESMKAMAESIGVGQLQEESCAALSEEVSYRIKEIAQDALKFMHH
GKRCKLTTSDIDYALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDIINT
PLPRVPLDVSLKAHWLSIEGVQPAIPENPPPAPKEQQKTESTEPLKAVKPGQEEEGSTQK
GQGATSAEAKGKKDGLMRMKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATD
PGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVV
TCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKSWLDDKTQ
WTTRYGCIAGLSELGPDVIKTLILPRLTVEGARIKAVSDGPVVSNIDKIGADHVQNLLLK
HCASVIAKACPLPDNVEQYRADYGYLGPMLCSHVVKARAQAALQAQQVNRTTLTITQPRP
TLTVSQSGIGGSGGSRTPSIIKVPSSLTLMSTRPGTPTQPSPPATKYIVMATSSGSSSTQ
QVITRTSSSVTSTVASATSTLQPLVKLESGGSRPLQKYIVVSLPSSSSLESKSGVLPPSS
STSPILLEARIKVDCSDSPGASTQSPH
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagcggaggccgaagcagtgcactgtggttctgcccacggagtcaatgaag
gccatggcagagtccataggagtggggcagctacaggaggagagctgtgccgccctgagc
gaggaggtcagctacagaataaaggagatcgcccaggacgcgttgaagtttatgcaccat
ggaaagagatgtaaactgacgaccagcgacatagattatgctcttaaactgaagaatgta
gagcctctctatggcttccagtcgcaggaattcatcccgttccgcttcgccagtggagga
gggagagagcttcacttctacgaggagaaggaggtagacctcagtgacatcatcaacaca
cccctccctagagtcccccttgacgtttcgctcaaagctcactggttaagtattgaaggt
gtccagcctgcgataccagagaacccacccccagcccccaaagagcagcagaagactgaa
tctacagagcctctcaaagccgtcaagcctggtcaggaggaggagggctccacccagaag
ggccagggagctacatctgcagaggctaaaggaaagaaggatggtctgatgaggatgaag
ccccgcagtactcacgagctctcagtggaacagcagctctactacaaggagatcacggag
gcctgcgtcgggtcctgtgaggccaagagagctgaggccctacagagtatcgccacagac
cccgggctctaccagatgcttcccagattcagcacttttatttctgaaggggtccgtgtg
aacgtggtgcagaacaacctggccctgctcatctacctgatgaggatggtcaaggccctc
atggacaaccccactctctacctagagaaatatctgcatgagttgatcccagcggtggtg
acgtgtatagtgagtaagcagctgtgtttgcggcctgacgtggacaaccactgggctctg
agggacttcgctgcccgtctgatggcccagagctgtaagaccttcagcaccaccaccaac
aacatccagtcgcgcatcactaagaccttcaccaagagctggttggatgacaagactcag
tggacgacacgctacggctgtatcgctggactgtctgaactaggacctgacgtgatcaag
acgttgatcctgcccaggctcactgtagaaggagctcgtatcaaagctgtgtctgatgga
cctgttgtctccaacattgataagataggagcagaccacgtccaaaaccttctactgaaa
cactgtgccagcgtcatcgctaaagcttgtcccctgcctgacaacgtggagcagtaccgg
gcagactacggttacctggggcccatgctgtgttctcatgtggtcaaggccagggcccag
gcagcactacaggcccagcaggtcaacagaaccacactcaccatcacacagcctcggccc
accctaacggtgtctcagagcggaataggagggtcaggggggtcccgtacccccagcatc
atcaaggtacccagctccctcaccctcatgtccacccgaccaggcaccccaacacagcca
tcgcccccggcaaccaagtacatcgtcatggcaaccagctcaggatcatcttccacccag
caggtgatcactcggacttcctcctcagtgaccagcacggtcgccagcgctacctccacg
ctgcagcctctggtcaagctggagtccggagggtcgcgacccctccagaagtacattgtg
gtgtccctcccctcgtcctcctctctggaaagtaagagtggggtgctccctccctcttct
tccacctcccccatcttgctggaagccaggataaaggtggattgctcagactcccctggc
gccagcacacagtccccgcactga
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integrated database retrieval system
