KEGG   Oncorhynchus kisutch (coho salmon): 109864432
Entry
109864432         CDS       T09179                                 
Name
(RefSeq) lissencephaly-1 homolog B
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki00565  Ether lipid metabolism
oki01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:oki00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    109864432
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oki03036]
    109864432
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oki04147]
    109864432
Chromosome and associated proteins [BR:oki03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    109864432
Exosome [BR:oki04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109864432
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR3_2nd WD40_WDHD1_1st EIF3I WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st LisH_PAC1 Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR41 NBCH_WD40 Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_EML WDR90_beta-prop_4th LisH Beta-prop_SPT8 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 Nucleoporin_N Beta-prop_NUP159_NUP214 Beta-prop_WDR11_2nd Pox_A_type_inc Beta-prop_ACSF4 ARMC9_LisH KH_GLD-3_2nd DUF2570 LisH_2 SutA-RBD LisH_WDR26
Other DBs
NCBI-GeneID: 109864432
NCBI-ProteinID: XP_020307809
Ensembl: ENSOKIG00005038509
UniProt: A0A8C7JM35
LinkDB
Position
LG19:complement(20724468..20776438)
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEITLGGPVAQKRDPKEWIPRPPERYALSGHRSPVTRVIFHPVF
SVMVTSSEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGSLIASCSNDQTVRVWVATSKECKAELREHEHVVECIAWAPDTAHPTILEATSSE
SKKNGKSGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLVHPGGRFIVSCADDK
TLRIWDYKNKRCMKTLCAHEHFVTSLDMHRTAPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcacagagacaacgagacgaactaaaccgagctatagcagactacctacgc
tccaatggctatgaggaagcctactccaccttcaagaaagaggctgaattagatatgaat
gaggagttagataagaagtacgctggtcttttggaaaagaaatggacctctgtcatcaga
ttacagaagaaggtgatggagctggagtcgaagctgaatgaggccaaagaggagatcact
ctagggggtccggtggcccagaagagggaccctaaggagtggatcccccgtcccccagag
agatacgccctgagcggccaccgctcccccgtcacacgggtcatcttccatcctgtcttc
tccgtcatggtcacctcctccgaggacgccaccatcaaggtgtgggactatgaggcaggg
gactttgagcggacactgaagggccatacagactctgtccaggacatctcctttgaccag
acgggcaagctgctggcttcctgttctgcagacatgaccatcaagctgtgggacttccag
ggcttcgagtgcatccgcaccatgcacggtcatgaccataacgtgtcgtctgtagccatc
atgcccaacggagaccacatagtctccgcctccagagacaagaccatcaaaatgtgggag
gtggccactgggtattgtgtaaagacatttacaggccacagggagtgggtgaggatggtc
cggcccaaccaggatggttctcttatcgccagctgttccaacgaccagacggtgcgtgtg
tgggtggcaacctccaaggagtgtaaggctgagctgcgagagcacgaacacgtggtggag
tgtatcgcatgggcccccgataccgctcaccctaccatcctggaggctaccagctcggag
agtaagaagaatgggaagtctggtccgttccttctctctggctctagagataagaccatc
aagatgtgggacatcagcactggcatgtgccttatgactctggtgggtcatgataactgg
gtgcgtggtgtgttggtgcaccctggaggcaggttcatagtgagctgtgctgatgataag
actctgaggatctgggactacaagaacaagcgctgcatgaagaccctgtgtgcccacgaa
cactttgttacctctctggatatgcaccggactgctccatacgtggtaacaggcagcgtt
gatcagacagtcaaagtgtgggagtgtcgctga

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