Oncorhynchus kisutch (coho salmon): 109864791
Help
Entry
109864791 CDS
T09179
Symbol
exosc3
Name
(RefSeq) exosome complex component RRP40
KO
K03681
exosome complex component RRP40
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109864791 (exosc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109864791 (exosc3)
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109864791 (exosc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP40_S1
KH_6
Rrp40_N
RRP40_N_mamm
RRP4_S1
Enterotoxin_b
Motif
Other DBs
NCBI-GeneID:
109864791
NCBI-ProteinID:
XP_020308331
Ensembl:
ENSOKIG00005028223
LinkDB
All DBs
Position
LG19:complement(38140444..38143023)
Genome browser
AA seq
275 aa
AA seq
DB search
MGALQQIYFRFCFFFLDFLCHIYCFPYQKCTFTDMLSCFKDKVGDVLLPGDVFSFQMPES
ITDSKPEKVVCGPGLRRNGDEVLVCKSGILRHKQPNLYWIDSQQRRYVPGKGESVIGIIT
AKSGDIFKVDVGGSEQASLSYLAFEGATKRNRPNVQVGDLVYSQFIIANKDMEPELVCID
SCGRANGMGVFGAGGLLFKVSLGLVRRLLAPQSEIAKDLEKMFPFEIVVGMNGRVWVKSK
TIQQTLIVANLLESCENMTAQQRQTLFRRVADGSI
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgctacaacaaatatacttccgtttttgctttttcttcctagatttcctgtgt
cacatttattgtttcccctatcagaagtgcacatttacagacatgctgagttgtttcaaa
gataaagttggtgatgttttattaccaggagatgtattttcttttcaaatgcctgaaagt
atcaccgacagcaaacccgagaaagttgtttgtggaccagggcttcggcgaaacggagat
gaagttctcgtttgcaaaagcggaatccttcgacataaacaaccgaatctgtactggata
gactctcagcaaaggaggtatgttccaggaaagggggaaagtgtgattggcatcataact
gccaagtcaggtgacatcttcaaggtggatgtaggggggagtgagcaggcgtcactctcc
tacctcgccttcgagggggctaccaagaggaatagacctaatgtgcaggtgggggacctg
gtgtactctcagttcatcattgccaacaaagacatggagccggagctggtgtgtatagac
agctgtggacgagccaacgggatgggggtgtttggagcaggcgggcttctcttcaaggtg
tccctaggacttgtacgcaggctgctggcaccccagagtgagatagccaaggacctggag
aagatgttcccctttgagattgtggtggggatgaacgggcgggtgtgggtcaagtccaag
accatccagcagaccctcatcgtggccaacctgctggagagctgtgagaacatgacagcc
cagcagcgacagacgctcttcagaagggtggccgacggatccatctag
DBGET
integrated database retrieval system