Oncorhynchus kisutch (coho salmon): 109864797
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Entry
109864797 CDS
T09179
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oki03016
]
109864797
Transfer RNA biogenesis [BR:
oki03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
109864797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_WDR19_1st
Beta-prop_EML_2
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
TPR_GEMI5
B-prop_COPA_B_2nd
TPR_9
Motif
Other DBs
NCBI-GeneID:
109864797
NCBI-ProteinID:
XP_020308336
Ensembl:
ENSOKIG00005029583
LinkDB
All DBs
Position
LG19:38250665..38264535
Genome browser
AA seq
1322 aa
AA seq
DB search
MRNLRLLKSLRCSELQGPGTPQCFSVRTDTRTVLIASEYSVIELDPRAGQVMNEVSLTAE
RYLPEDGSGTVVGIQDLPDQESVCVATATGDVILYNLSTNQLECVGSVNSGLTAMSWSPD
QELVTLTTGQDTIIMMTKNFEPIIEVGIHQDDFGEGKFITVGWGKKETQFHGSEGKHAAQ
KKTIEVQPAMSWDDRRPRVTWRGDGQLFAVSSVCPQTGARKVRVWNRECVLQSTSETVNG
LEQSLCWKPSGSLIAATQRHPNKHSVVFMEKNGLLHGDFTLPFGKEQVKVNALLWNSDST
VLAVWLEDMTREEGGQVNTYIQLWTVGNYHWYLKQSLYFGSDPQRAPADVSWDPERPLGL
HLVTRGWASLTYDWGWSTDRSHGEDGQDNANVAVIDGDKVLVSTFRQCVVPPPMCAYELQ
LPAPVNLVTFHRQPQRTNELAALTADGHILVYGQGTGDQSDPTARVGGFRSITHAPQLKT
TYRVLLDQELPLALRLLLWLRGDVFLGVGGSAEGPSQSTLLILGPSEAQSPQSTLEIKSR
VEVEGHVISMCHSSNTGTVALQLEDGQIRKFLWDSLKPSVVGWQDTTGYSINFPDPCVQT
ALCTIEKEHLLGLTDRSHLFVDDTEVASNVSSFVVYDDFLLLTTHSHTCRCLRLSTLTVK
GLQVALAADGGQNDQNDETLRRVERGSRIVTVVPQDTRLILQMPRGNLETIHHRALVLAQ
LRKCLDSQKFREAFECMRKLRINLNLIYDHNPKVFLESVETFLRQLDSINHINLFLTELK
EEDTTTTMYPYPSNATGQSAPGACGKKVDIVCDALRCTMESMDQHKYCLSILTSHVKKTV
PELEVALQKVHELRVNPPGAANAVSAEEALKYLLFLVNVNELYEHSLGTYDFDLVLMVAE
KSQKDPKEYLPFLNMLKTLEPNYQRYTIDKHLKRYRKALHHLSKCGEEHFTEALNLVKDQ
RLYSEALGLYPTDSPQYKALSCAYAEYLVEQQQAEQAGLLLWRCGEAVRALQAFVGSASW
RNALCVAEQIPLPPDQLALLARDLAEKLIELRRYTEAAILLEQYAKDCEEAISALITGAV
WEEALRLVYLYNRQDIIETNLKPALLEACSSQTSYLEAQRAMFIRHKTRLAMVRELKEKA
RLELLDEDVPDCPEAELYSEASSVMSGSRAGSKYSHSNSRISSRSSKNRRKAERKKLSLK
EGTPLEDMALLHALAEIIHSVDKMREEVHSLLKGLMLFQFDGQAGRLQQAYGEALQMIEV
ALPEVWQEGLQQSQAPITGPNSTANSIMASFQQPRPSSTQDSETPPPPKMRNGVKWKLSI
LK
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgcggaacttgaggttgctgaagagccttcgttgctcagagctgcagggcccgggcacg
ccgcaatgtttctctgttcggacagacacccgtacggtgctcatcgcttcagaatactcc
gtcatcgagttggacccacgagctggccaggtgatgaatgaggtgtcgttgacagctgag
cgctaccttccagaggatggcagtgggacagttgttggtatccaggacttaccagaccag
gagtctgtgtgtgttgctacagccactggtgatgtcatcctctacaacctcagcactaac
cagttggagtgtgtgggcagtgtgaacagtggtctaacagccatgagctggagcccggac
caggagctggtcactctcaccacaggtcaggacaccattatcatgatgaccaaaaacttt
gaacccatcatagaggttgggatccatcaggatgactttggagaggggaagtttattaca
gtgggctgggggaagaaagagacccagttccatggctcagagggcaagcacgctgcccag
aagaagaccatagaggtgcagccagccatgtcctgggacgaccgcaggccgagggtgacg
tggagaggagatggccagctcttcgctgtgagctctgtttgcccccagactggtgccagg
aaggtcagagtgtggaacagagagtgtgtcttacagtcgacaagtgaaaccgtcaacggt
ctggagcagtcactgtgttggaaaccgtcaggtagtttgatagcagccacacagcgtcat
cctaacaagcacagtgtggtgtttatggagaagaatgggctcctacacggggacttcacc
ctgccctttggaaaagaacaggtcaaggtgaatgcactgctgtggaacagcgactctact
gtgttggctgtgtggctagaggacatgacacgagaagaggggggccaagtcaacacatac
attcagctgtggacagtaggtaactaccactggtacctgaagcagagcctatactttggc
agcgacccccagagggcgccagccgatgtgagctgggatcctgagaggcccctggggctg
cacctggtgacccgaggctgggctagcctgacctacgactggggctggagcactgaccgc
agccacggggaggacgggcaggacaacgctaacgtggctgtgatcgatggagacaaggtc
ctagtgtcgacatttcgtcagtgtgtggtgcccccacccatgtgtgcctacgagctccag
ctgcctgcccctgtcaacctggtgaccttccaccgccagccccagagaaccaatgagctg
gcagcactcaccgctgacggacacatcctagtctatggtcaaggtactggggaccagagt
gaccctactgccagagtgggaggattccgatctatcacacacgctcctcagttaaagact
acctacagggttttgttggatcaggagctgcccctggctctgcgtctcctgctgtggctg
aggggggatgtgttcctgggggtggggggcagtgcagaggggccgtcccagtccacgctg
cttatcctgggaccatcggaggcccagagcccccagtcaaccctggagatcaagtcacgt
gtggaggttgaaggtcacgttatcagcatgtgtcacagctccaatacgggcacagtggcc
ctgcagctggaggacggccagatcaggaagttcctctgggattccctgaagcctagtgtg
gtgggctggcaggacacgacaggctacagcatcaacttcccagatccctgtgtgcagacg
gccctctgtactatagaaaaggagcatctgctggggcttacagaccgatctcacctgttt
gttgacgacacagaggtggcctccaacgtctcctccttcgtggtctacgatgacttcctg
ctactcaccacacactcgcacacatgccgctgcctccgactcagcacactcactgtcaaa
gggctgcaggtggccttggctgcagacggaggtcagaatgaccagaatgacgagactctc
cgcagggtggaaaggggctctagaatcgtcactgtggtcccccaggacaccaggctcatc
ctgcagatgcctcgcggtaacctggagaccatccaccatcgagcgctggtattggctcag
ctcagaaagtgtctggacagtcagaagttccgagaggcctttgagtgcatgaggaagctg
cggatcaacctcaacctgatttacgaccacaaccccaaggtgtttttagagagcgtggag
accttcctgagacagctagactctatcaaccacatcaaccttttcctcacagagctcaaa
gaggaagataccactacgacaatgtacccatacccatcgaacgctacaggccagtcagcg
cctggggcttgtgggaaaaaggttgacattgtttgtgatgcgctgcgctgcaccatggaa
tctatggaccaacacaagtactgcctgtctatcttgacgtcacatgtgaagaagactgtt
cctgagctggaggttgccctgcagaaagtccacgagcttcgagtgaacccacccggtgca
gccaacgcggtgagtgcggaggaggctctgaagtacctgttgttcctagtcaatgtcaac
gagctgtatgaacactctctgggcacctacgactttgacttagtcctcatggtagctgag
aagtcccaaaaggaccccaaagagtaccttcccttcctgaatatgctgaagactctagag
cccaactaccagcgctacaccatcgacaaacacctgaagagatacaggaaggccctgcac
cacctcagcaagtgtggtgaggagcacttcactgaggccctaaatctggtgaaggaccag
aggctgtatagtgaagccctggggctctatccaacagacagccctcagtacaaggccttg
agctgtgcctacgctgagtacctggtggagcagcagcaggcggagcaggcagggttgttg
ctgtggcgctgcggcgaggcggtccgtgccctccaggccttcgtgggcagtgccagctgg
aggaacgccctctgtgtggcagagcagatcccccttccacccgatcagctggcactgctg
gctagggacctggcagagaaactgatagagcttagaagatatacggaggcagccatattg
ttggagcagtatgctaaggactgtgaggaggccatctcggctctgatcacaggtgcagtc
tgggaagaagcacttcgactagtgtatttgtacaacagacaagacatcattgaaacaaac
ctcaaaccagctctcttggaagcatgtagttctcagacctcctacctggaagctcagagg
gcgatgttcattcgtcacaaaacccgtctggccatggtacgggagcttaaggaaaaggcc
aggctggagttactggatgaggatgtcccagactgtccagaggcagagctctactcagag
gccagtagtgtgatgtccggcagccgtgccggctccaagtactcacatagtaactcccgc
atctcctcgaggtcatctaagaatcgccggaaggctgagcgcaagaagttgagtctgaag
gaagggacccccctagaggacatggctctgctgcacgccctggcagagatcatccactct
gtggacaagatgagagaggaggtgcacagcctgctgaagggcctaatgctgttccagttt
gacggacaggcggggaggctgcaacaggcctatggggaggctctccagatgattgaggtg
gcccttcctgaggtgtggcaagagggtcttcagcagagtcaggctccgattaccggtcct
aactccacagccaacagcatcatggcttcatttcaacagccaagaccctcatcaacccaa
gattcagagactcccccacccccaaagatgagaaatggtgtcaagtggaagctgagtatt
ttgaagtag
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