Oncorhynchus kisutch (coho salmon): 109864805
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Entry
109864805 CDS
T09179
Name
(RefSeq) protein transport protein Sec24B-like isoform X1
KO
K14007
protein transport protein SEC24
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109864805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109864805
Membrane trafficking [BR:
oki04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
109864805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
HpaB
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
109864805
NCBI-ProteinID:
XP_031654301
Ensembl:
ENSOKIG00005032196
LinkDB
All DBs
Position
LG19:38594231..38627564
Genome browser
AA seq
1189 aa
AA seq
DB search
MSAPGFTSLKTSLGHSLNSTPNGGAAPPYQNGPGGQTYPSTYPLTGYYGAGPQQQGNPTI
PGQCAPAPPKAPITNIDHSAYCHQQPLQPTAAPTVAPSAYGATQGSHPPSLPYGTPTTLP
TSATPPNSQHAPSFQQPAPYAQTGAYYGQQQYPTSQTQHHPQQPNLVLAPPTSPGAPLYP
IVSYPSVPGSSQYGTLRSSQAPTGPAAVPNLMGAPLHQYAPGNDTSHPASTAAVPPGYSM
APPGQPATVNGQGNADPVLQHYDQSHQAPMTHDHYRGGVKHNTGGADRDMPPLGIPSTSV
NSSPGHQQGMHYGYLANSGASSANAAANVAPSSSSSDEEEEEDEEAGGDSSSTTTGSASP
VPNSYDSLEGGSYPEFSNPPSADMPNQPVYQQRPVSRTDSSPSHGGYNQTGYQHLPQPFP
NMSQLSAALGGLSGVPELEVEALRPVNLLQERNLLPHQPLDAPEPNLSADLKKANCSPDT
FRCTLTNIPQTQALLNKARLPLGLLLHPFRDLAQLPVITSNTIVRCRSCRTYINPFVSFL
DQRRWKCNLCYRVNDVPDEFMYNPVTRSYGEPHKRPEVQNSTVEFIASSDYMLRPPQPAV
YLFVLDVSHNAVEGGYLNVFCHTLLENLDKMPGDTRTRVGFITFNSTIHFYNLHESLSQP
QMLVVSDIDDIFIPTHDSLLVNLKESRALVRVLLTSLHSMFSQTRETHSALGPALQAAYK
LTSPTGGRVSVFQTQLPTLGPGLLQSREDPNQRSSTKGVQHLGPATDFYKKLALDCSGQQ
IGVDLFLLSSQYSDLASLACMSKFSAGSIFYYPSLHHVHNPAQLDKFQKDLERYLTRKIG
FEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLANINPDSGFAVQMSIEESLADTSLACFQ
SALLYTSSKGKRRIRVHTLCLPVVSQLSDVYAGADVQAITCLLANMAIDRSISSSLSDAR
DALVNAVVDSLSAYKNTVSNIQQSGLIAPAALCLFPLYVLALLKQKALRMGTSTKLDERV
FAMCEFKSQPLQQIMRAVHPDLYRLDTMSDQGALHLNDCIVPQPHLLHLTAEKLTREGAF
LMDCGSVFYLWIGKCCNDVFIRDMLGCPNHASIPPSMTQIPELETPLSERLRALLAWLQD
SRPFSSTLHVVKDDATAKTSFFQHLVEDRSDSALSYYEFLLHIQQQMSK
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgccgggttttacgagcctgaaaacctctctcggtcacagcttgaattcaacg
ccgaatggtggagcagcacccccctatcagaatggtccaggggggcagacttacccatcc
acatatcctttgacggggtactatggagccgggcctcaacagcagggcaacccaaccatt
ccaggccagtgtgcccctgcccccccaaaagctccaatcacgaacattgatcacagtgct
tactgccaccagcagccgctgcagcccactgctgcacctactgtagccccctctgcatac
ggagcaacccaaggctctcaccctccctctctgccctatggcacccccaccactcttccc
acttccgctacccctccaaactcccaacatgcaccttcattccaacaaccagccccatac
gcacagactggggcctactatggacagcagcagtaccctacctcccaaacgcaacaccac
ccccagcagccaaacttggttttggcaccccccaccagcccaggtgctcccctgtatccc
attgtctcgtacccctctgttccgggaagcagccagtacggtacattgcgttcctcccag
gctcccaccggcccagcagctgttcccaacctgatgggcgctcccctccaccagtacgcc
ccaggaaatgacaccagtcacccagcatctactgcagcggttccccctgggtatagcatg
gctccacccggccaaccagccacagtcaacggccagggtaatgcagacccagtcctccag
cattatgaccaaagtcaccaggcacccatgacacatgaccactacagaggaggagtcaaa
cacaacactgggggtgctgacagggacatgccacctttaggaatcccatccacttcagtt
aattcctccccagggcatcagcaaggcatgcactacggatatttagccaatagtggcgct
agctctgccaacgccgccgccaacgttgccccctcgtcatccagctctgatgaggaggag
gaggaggatgaggaagcaggcggggatagttcctcaaccaccaccggcagtgcgtccccg
gtgcccaacagctacgactccctggaaggcggcagctacccagagttctccaatccacca
tctgccgacatgcccaatcagccagtatatcagcagaggccggtctccaggacagactcc
tccccctcacacggcgggtacaaccaaactggctatcagcatttgccacagcccttccct
aacatgtcccagctgtctgcggccctcgggggactgagcggtgtaccagagctggaggtg
gaggcgctgcggccggtcaacctgctgcaggagaggaacctgctgccccaccagcccctg
gatgccccagaacccaacctcagcgctgacctaaagaaggccaactgcagcccggacacg
ttcaggtgtaccctgaccaacatcccccagacccaggccctgctgaataaagcccggctt
cccctaggcctgctcctgcaccccttcagagacctcgcacaactcccagtgatcacgtcc
aacaccatagtgagatgtcgctcctgtcgcacctacattaaccccttcgtctccttcctg
gatcagaggagatggaaatgcaatctctgttacagggtcaacgatgttcctgatgagttt
atgtataacccagtgacccgctcgtatggagagccccacaagaggccagaggtacagaac
tccactgtggagttcatagcctcttcagattacatgctgcgtccccctcagcctgcagtg
tacctgtttgtgctggatgtgtctcacaacgcggtggagggaggctacctgaacgtcttc
tgtcacaccctactggaaaacctggacaagatgcctggggacacgcgcacccgagttggc
ttcatcaccttcaacagcaccatccacttctacaacctccacgagagcctctcacagccc
cagatgttggtggtctccgacatcgacgatatcttcattccaacccacgacagtctcctg
gtgaacctgaaggaaagcagagcgctggtgagggtactgttgacctccctacacagcatg
tttagccagaccagggagacccacagtgccctgggcccggcactgcaggctgcctacaaa
ctcacgtcccccacgggggggcgcgtctccgtgttccagacccagctacccacgctgggc
ccaggcctgttacagtcccgggaggaccccaaccagaggtccagtaccaagggggtccaa
cacctgggcccagccacagacttctacaagaagctggccctggactgttctggccaacag
ataggagtggacctgttcctcctcagctcccagtactctgacctggcctcactagcctgt
atgtctaagttctcagcgggcagtatcttctactacccctcgttgcaccacgttcacaac
ccggcccagctggacaagttccagaaggatctggagcgctacctcaccaggaagatcggc
ttcgaggccgttatgaggatacgctgcaccaaaggcttgtccatccacacgttccacggg
aacttctttgtacgctcgacggacctgctgtccctggccaacatcaacccagactcaggc
ttcgccgtgcagatgtctatagaggagagcctggccgacacctcactggcctgcttccag
tctgcgctgctgtacacctccagcaaagggaagaggcggatcagggtccatactctgtgt
ctgccagtggtgagccagcttagtgatgtatatgccggggctgacgttcaggccatcacc
tgcctcctagccaacatggccattgaccggtcgatatcgtcaagcctgtcggatgcccgg
gatgccctggtgaatgcggtggtggactctctgagcgcatacaagaacactgtatctaat
atccagcagtctggtcttatcgcccctgcagccctgtgtctcttccccctctacgtgctg
gcactactcaaacagaaagcactgcgcatggggaccagcaccaagcttgacgagcgtgtc
ttcgccatgtgtgagttcaagagccagccgctgcaacagatcatgcgtgcggtccacccc
gacctctaccgcctggacaccatgtcagaccagggggctctccacctgaacgactgcata
gtgccccagcctcatctgctgcacctcacggctgagaagctgaccagagaaggagcgttc
ctcatggactgtggcagcgtcttttacttgtggattgggaaatgctgtaatgatgtgttc
attcgggacatgttgggatgcccaaaccatgcttctataccccctagcatgacccaaatt
cctgagctggaaacccctctgtctgaacgactccgtgcactcctcgcctggctacaggac
tcgagacccttcagctcaactcttcacgtcgtgaaggatgatgctacagcgaagaccagc
tttttccagcacttggtagaggaccggtcggattcggccctctcctactacgagttcctg
ctccacattcagcaacagatgtccaagtag
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