Oncorhynchus kisutch (coho salmon): 109864827
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Entry
109864827 CDS
T09179
Name
(RefSeq) TBC1 domain family member 9B isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109864827
Membrane trafficking [BR:
oki04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109864827
Endosome - Golgi transport
Rab GTPases and associated proteins
109864827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_5
EF-hand_6
EF-hand_8
EF-hand_7
SH3-WW_linker
Motif
Other DBs
NCBI-GeneID:
109864827
NCBI-ProteinID:
XP_020308394
Ensembl:
ENSOKIG00005038477
LinkDB
All DBs
Position
LG19:complement(40533052..40576850)
Genome browser
AA seq
1219 aa
AA seq
DB search
MWITPEEVLLANALWVSERANPFFILQRRKGHGKGGGITGLLVGTMDVVLDSSARVAPYR
ILHQTGDSQIFCSIACGSSRKEITEHWEWLETNLLQTLSIFDNNEDITTFVKGKISGIIA
EENKSKAALEDEDSGKFREAELKMRKLFGMPGEEKLVNYYSCSYWKGRVPRQGWVYLSVN
HLCFYSLLLGKEVTLVVQWTEVTRLEKNATLLFPESVRVSTRHTEHYFSMFLNVNDTFKL
MEQLATIAMRQLLDNESFAADHSLPKACKTLKNVSALKRDLDARAKNERYRALFRLTQDE
RLDGHTDCTLWTPFAKMHIVGQLFVSNNYICFCSREEDLCQLIIPLREVSIVEKADSSSV
LPCPVSISTKNKMTFLFANLKDRDFLVQRISDFLQRTPESGHSGSPSPSTTPLSSSLPTP
TGAAGEPSQRRHYSPSLPTATQSLLHIYQKDAPEEHGPKATKEKMKEESWNIHFLEFGRG
VCMYRTSKTRELVLNGIPESLRGELWLLFSGAQNEMDTHPGYYAERVEQAMGRCTLATEE
IERDLHRSMPEHHAFQNEMGIAALRRVLTAYACRNPGIGYCQAMNIVTSVLLLYCTEEEA
FWLLVALCERMLPDYYNTRVVGALVDQGVFEELTRACLPFLYEHMQELGVISTISLSWFL
TLFLSVMPFDSAVLLVDCFFYEGIKVIFQVALAVLHANMDTLLDCNDEGEAMTILGRYLD
NVVNKQTVSPPIPHLHALLTSGDEPPPQIDVFQLIKSSCEKFGSLRADVIEQMRFHQRLK
VIQSLEDTAKRSVVRAIMTDSAFSIEELEELYVHFKAKHIMSCYWGASTTAAERHDPSLP
YLEQYRIDLGQFCQLFGALGTWLCGTHTATLAARLFRLLDMNKDGLINFKEFVTGLSGMY
HGDMTEKLKLLYNLHLPPALCPEEAESALEATQFFTDDTPQEPPFLSDLDFLVQEVTSGE
EVKVAEDALGSGDAEEKKEVKDYKYYLRMWAMENEPKKETIKDLRRMNQEQFIELCKTLY
NMFSEDPLEQELYHAIATVASLLLRIGEVGKKFTNNGANKPTDTTNAQAPAPAAELLQPE
KEEPDGESSSGQSLVCRALAEAQLETLPQQTSDEEVKDDTSVSSYSMVSTGSLQCEDIAD
DTVLIGCAGDQQRQGSILEGDWSITFEQVLASMLTEPPLVDYFEKKGDIQARMAICKMQR
RVERQVSSSSDHELAQLST
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgtggataaccccagaggaggtgttgcttgccaacgctctgtgggtgagcgaaagggcg
aaccccttcttcattctccagaggagaaagggccatggcaaaggagggggcatcactggc
ttgttggtgggcaccatggatgttgtcctggactccagtgccagagtggctccctatagg
atcctgcaccagacaggggactcacagatcttctgcagcatcgcatgtggctcctcccgg
aaggagatcacagagcattgggagtggctggagaccaacctgctccagacgctctccatt
tttgacaacaatgaagatatcaccaccttcgtcaaggggaagatctcgggcatcatcgcc
gaggagaacaagagcaaggctgccctggaggatgaggactctggcaagttccgtgaggct
gaactgaagatgaggaagctgtttggcatgcccggcgaggagaagctggtcaactactac
tcctgtagctactggaagggccgtgtgccccggcagggctgggtctacctcagcgtcaac
cacctctgcttctactctctcctcctggggaaagaagtgaccctggtggtgcagtggacg
gaggtcacccgcctagagaagaacgccacgctgctgttcccggagagtgtgcgggtgagc
acgcggcacacggagcactacttctccatgttcctcaacgttaacgacaccttcaagctc
atggagcagctggccaccatcgccatgcgccagctgctggacaacgagagcttcgcggcc
gaccactcgctgcccaaggcctgcaagacgctcaagaatgtctcagcactgaagagggac
ctggacgcacgggccaagaacgaacgttaccgggcgctgttccgcctgacccaggacgag
cgcctggacggacacacagactgcacgctgtggactccctttgccaagatgcacatcgtg
ggccagctgtttgtctccaacaactacatctgcttctgcagccgtgaggaggacctctgt
cagctcatcattcccctcagagaggtgtccattgtggagaaggcagacagcagcagcgtc
ttgccctgccccgtgtccatcagcaccaagaacaagatgaccttcctcttcgccaacctc
aaggaccgtgacttcctggtccagcgcatctccgacttcctgcagcgcacccctgaaagt
ggccattcgggttctcccagccctagtaccacccctctctcctccagcctccccacaccc
actggtgcagcaggggaaccgtcccagaggcgccactacagccccagcctgccaacagcc
actcagagcctgctccacatctaccagaaggacgccccagaggaacacggacccaaagct
acaaaggagaagatgaaggaggagtcgtggaacatccacttccttgagtttggcaggggt
gtgtgtatgtaccgtacctccaagaccagagagcttgtgctcaatgggatccctgagagc
ctccggggggagctgtggctgctcttctcaggagctcagaatgagatggacacccaccct
ggctactacgctgagcgggtggagcaggccatgggccgctgtaccctggccacggaggag
atcgagagggacctgcaccgctccatgcctgagcaccacgccttccagaatgagatgggc
atcgctgccctccgcagggtcctcaccgcctacgcctgccgcaaccctggcataggatac
tgccaggcgatgaacattgtgacgtcggtactgctgctgtactgtacggaggaggaggcc
ttctggcttttggtggctctgtgtgagaggatgctgcctgactactacaacaccagggtg
gtgggtgctctcgttgaccagggtgtgtttgaggagctgactcgcgcgtgcctccctttc
ctctacgagcacatgcaggagctgggagtcatctccaccatctccctctcctggttcctc
accctgttcctcagcgtcatgcccttcgacagcgctgtgcttctggttgactgcttcttc
tatgagggcatcaaggtcatcttccaagtggcactggccgtgctgcacgccaacatggac
accctactggactgcaatgacgagggagaggccatgaccatccttggacggtatctggac
aatgttgtcaacaagcagaccgtgtctccgcccattccccacctccacgccctgttgacc
agtggcgatgagccgccgcctcagattgacgtgttccagctcatcaagtcatcctgtgag
aagtttggtagtttgcgtgctgatgtcatcgagcagatgaggttccatcagaggttaaag
gtcatccaatcgctggaggacaccgccaagaggagcgtggtaagagctatcatgacagac
tccgccttcagtatcgaggagctagaagaactctatgttcacttcaaggccaagcacata
atgagctgctactggggggccagcaccacagcggcagagcgccacgaccccagtctgccc
tacctggagcagtaccgcattgacctgggacaattctgccagctgttcggggccctggga
acctggctctgtgggacacacaccgccacgctggctgcgcgcctcttccgcctgctggac
atgaacaaggacggcctcatcaacttcaaggagtttgtcacgggtctgagtgggatgtac
cacggagacatgacagagaaactcaagttactgtacaatcttcacctgccgccagcattg
tgtccagaggaggccgagtcggcactggaagctacacagttcttcactgatgacactcca
caggaacctcccttcctgtctgatctggacttcctggtgcaggaagtgacctcaggagag
gaggtgaaagtggctgaggacgcattgggaagcggagatgcagaggagaagaaagaggtg
aaggactataagtactacctgcggatgtgggccatggagaatgagcccaagaaggagacc
attaaagaccttcgcaggatgaaccaggagcagttcatagagctgtgtaagaccctgtac
aacatgttcagcgaggacccactggagcaggagctctaccacgccatcgccactgtggcc
agcctgctgctgcgcatcggagaggtgggcaagaagttcaccaacaacggcgccaacaaa
ccaaccgacaccaccaacgcccaggctcccgcccccgccgctgaactgctccaacccgaa
aaagaggagccggatggggagagcagctcagggcagtccctggtctgcagggccttggcg
gaggcccagctggaaacactgcctcagcagacgtcggacgaagaagtgaaggatgacacg
tcggtctcgtcctactccatggtgagcacaggttctctgcagtgtgaggacatcgccgac
gacacagtcctgattggctgcgccggcgaccagcagcgacagggaagcatattggaaggc
gattggtccatcacctttgagcaggtgctggcgtcgatgctcaccgagccgcccctggtg
gactactttgagaagaagggagacattcaggcaaggatggctatctgtaagatgcaaagg
agggtggaaaggcaggtgagctcgtcaagcgaccacgaattggcccagctctcaacctga
DBGET
integrated database retrieval system
