Oncorhynchus kisutch (coho salmon): 109864841
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Entry
109864841 CDS
T09179
Name
(RefSeq) prolactin regulatory element-binding protein-like isoform X1
KO
K14003
prolactin regulatory element-binding protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109864841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109864841
Membrane trafficking [BR:
oki04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
109864841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
EIF3I
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_EML
PEP5_VPS11_N
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_IP5PC_F
VPS11_N
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
109864841
NCBI-ProteinID:
XP_020308424
Ensembl:
ENSOKIG00005001603
UniProt:
A0A8C7C9S1
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Position
LG2:28847792..28858010
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AA seq
429 aa
AA seq
DB search
MGKWRMPDLYRAPFPLYTIKVDPKTGWVITAGGGGASKTGIKNAVHFLGLELVGDQHCAT
LVHSHDTDTRATMNLAIGGDVIAAGQDGKCSLMRFRQRQTRGKAAAKDAGGGSEQGAARR
RAGKGGKGSEGAAAARGNVSEMKDNTTQISVDTFGEVQSDLNPQDPLQKCVRFSPDLSLL
LTGGTDGHIRVWEYPSLKEKLNFKAHEGEIEDLDISPNNKHLVTVGRDFACSIWSGNQLA
MSLCWHEKMPQIAAKSYRYMACRFGKVEDQKDNMRLYTVQIPHKRDRKPPQCYLSKWDGQ
NFLPMLTNPCGTEVISTLAVSDSGTFLGLGTVTGSVAIYIAFSLQKLYYVQESHGIVVTD
LAFLPDTPKGQSLKGNNEAAMLSVAVDCRCQMHTVRNRRSFPIWLVLFFCGLMVVGAVLL
LQHLFPGFI
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatggaggatgccagacctgtatagggcccccttccccctctacacaatcaaa
gtcgaccccaaaacaggatgggtgatcactgcaggagggggaggtgcttccaagacgggc
ataaagaatgcagtgcacttcctgggtttggagttggtaggagaccagcactgtgccacc
ctggtgcactctcatgacacagacacgcgtgccaccatgaacctggcaataggtggggat
gtgatcgccgcagggcaggacggcaaatgcagcctcatgcgcttcagacaacgccagacc
aggggcaaggccgcagccaaggacgcagggggtggcagtgagcagggcgcagctaggaga
cgagctgggaaagggggtaagggtagtgagggagctgctgctgctaggggcaatgtgtcc
gagatgaaggataacaccacccagatctctgttgacacgtttggggaggtgcagtcggac
ctcaatccccaggaccccctccagaagtgtgtgaggttcagtcccgatctcagcctccta
ctgactggcggaacagacggacacatcagagtgtgggaatacccctccttaaaagagaag
ttgaacttcaaagcccatgagggggaaattgaagacttggacatcagtccgaataacaag
caccttgtgacagtgggccgggactttgcctgcagtatatggagtggcaaccagctggcc
atgagcctctgttggcatgagaagatgcctcagatagcagcaaagtcataccgctatatg
gcttgcaggtttggaaaagtcgaggaccagaaagacaacatgaggctctacaccgtccag
atcccccacaaacgagacagaaaacctccacaatgctacctctctaaatgggacggccag
aacttcctacccatgctgacgaacccctgcggcactgaggtcatctccaccctggctgtc
agtgactctggaacctttcttggccttgggacagtgacgggatcagtagcaatctatatt
gccttttcactacagaagttgtactatgtgcaggagtcccacggcattgtggtgaccgat
ctggccttcctgcctgacactcccaaaggccagagcctcaaagggaacaacgaggcagcc
atgttgagtgtggctgtggactgccgctgtcagatgcacactgtacgcaaccgaagatcc
ttccctatctggctggtgctgttcttctgtggcctcatggtggtgggagctgtcctgctc
ctgcagcacctcttcccaggattcatttag
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