KEGG   Oncorhynchus kisutch (coho salmon): 109864981
Entry
109864981         CDS       T09179                                 
Symbol
taf12
Name
(RefSeq) transcription initiation factor TFIID subunit 12
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    109864981 (taf12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oki03021]
    109864981 (taf12)
   03036 Chromosome and associated proteins [BR:oki03036]
    109864981 (taf12)
Transcription machinery [BR:oki03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     109864981 (taf12)
   Coactivators
    SAGA/TFTC/STAGA complex
     109864981 (taf12)
Chromosome and associated proteins [BR:oki03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     109864981 (taf12)
    STAGA complex
     109864981 (taf12)
    TFTC complex
     109864981 (taf12)
    SAGA complex
     109864981 (taf12)
    SLIK complex
     109864981 (taf12)
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone TFIID-31kDa TAF4 CENP-T_C TAF10 Pheromone
Other DBs
NCBI-GeneID: 109864981
NCBI-ProteinID: XP_020308676
Ensembl: ENSOKIG00005001728
UniProt: A0A8C7CJD1
LinkDB
Position
LG2:complement(29455857..29461412)
AA seq 162 aa
MTQYQPQSNRSNFFTVKAEASSTPPLATSMANSSAAAPGKVMGTPGPAGRISPEGSQVLS
KKKLQDLVREIDPNEQLDEDVEEMLLQIADDFIDSVVTAACQLARHRKSNTLEVKDVQLH
LERQWNMWIPGYGSDEIRPYKKACTTEAHKQRMALIRKTTKK
NT seq 489 nt   +upstreamnt  +downstreamnt
atgacccagtaccaaccacagtccaaccgttccaacttcttcaccgtgaaagccgaggcc
tcctcaacaccacctctcgccaccagcatggccaatagcagcgccgccgctccagggaag
gtgatgggcacacctggccctgctggcagaatcagcccagaaggaagtcaggtgttgagt
aaaaagaagctgcaggacctagtaagagagattgaccccaatgagcagctcgatgaggat
gtggaggagatgctgctgcagattgcagatgactttattgacagtgtggtgacggctgcc
tgtcagctggcccgccatcgcaagtccaacaccttagaagtgaaggacgtccagctacac
ctggagcgccaatggaacatgtggattcctggctatggttcagatgagattcggccgtat
aagaaggcttgtaccacagaggcccacaaacagagaatggcattgatccgcaaaacaacc
aaaaagtag

DBGET integrated database retrieval system