Oncorhynchus kisutch (coho salmon): 109865034
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Entry
109865034 CDS
T09179
Name
(RefSeq) ras GTPase-activating protein-binding protein 1
KO
K17265
Ras GTPase-activating protein-binding protein 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
109865034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109865034
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109865034
Enzymes [BR:
oki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
109865034
5.6.2.5 RNA 5'-3' helicase
109865034
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
109865034
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109865034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2
RRM_1
RRM_7
NXF_NTF2
Motif
Other DBs
NCBI-GeneID:
109865034
NCBI-ProteinID:
XP_020308734
Ensembl:
ENSOKIG00005014488
UniProt:
A0A8C7FVR6
LinkDB
All DBs
Position
LG19:59728043..59736483
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AA seq
491 aa
AA seq
DB search
MVMEKPSAQLVGREFVRQYYTLLNQAPDYLHRFYGKNSSYVHGGLDNNGKPVESVYGQSE
IHKKVLALNFRDCHTKIRHVDAHATLNEGVVVQVMGELSNDMQPMRKFMQTFVLAPEGTV
ANKFYVHNDVFRYQDEVFGDSDSEPPEESDEDVEEMEERVPSPEVAQEEAAAFYKQTPCT
EAKRPEEEVALTPEPEAEPEAEPESEAEPDVVDGKRGLEPETLQQQEHTTEEQGEQCPVS
SPLPSATTDPAPAPAEDNRPFSWASVTSKNLPPSGAVPVSGIPPHVVKVPSAPPRVEVKT
EAAAQRTQPRGDQRPREARPGPPPVRGPRPGVREGEQGESSEIGRVVRYPDAHQLFVGNV
PHDVDKAELKEFFQQYGTVLELRINSGGKLPNFGFVVFDDSEPVQKILSNRPIKFRGDVR
LNVEEKKTRSAREGDRRDIRPRGPGGPGGPRERIGGPRGPPTRGGMAQKPSFGSGRGTGP
SEGGRYMGPRQ
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggagaaaccaagtgcccagctcgtggggcgggagtttgtccgacagtactac
acactactcaaccaggcacccgactacctgcacaggttttatgggaaaaattcctcctat
gtacatggaggtctggacaacaatggcaaaccagttgaatcagtctacggacagtcggag
atccataaaaaagtgttggcgctgaactttcgtgactgccacaccaagatcagacacgtg
gacgcccatgcgaccttgaacgagggcgtcgtggtgcaagtgatgggggagttgtccaac
gacatgcagcccatgcgcaaattcatgcagacattcgtgctggcccctgagggcactgta
gcaaacaagttctacgttcacaacgatgtattccgttaccaagacgaagtgtttggggat
tctgactcagaaccccctgaagagtctgatgaggatgtggaggagatggaggagagagta
ccatcacctgaggtggcccaggaagaggctgcagccttctacaaacagacaccttgcacc
gaggccaagagaccagaggaggaggtggctttaaccccagagcctgaggcagaacctgag
gcagagcctgagtctgaggcagagccagatgtggtggatggaaaacggggtttggagcca
gagaccctgcagcagcaggaacacaccacagaggagcagggagagcagtgtccagtctcc
tcacccctgccctctgccactactgaccctgcccccgcacccgctgaagataaccggcct
ttctcctgggcctctgtcaccagtaagaaccttccccctagcggcgctgtccccgtctct
ggcatccccccccacgtcgtcaaagtcccctcggcaccgcccagggtggaggtgaaaaca
gaagccgcagcacagagaacacaaccgagaggagaccagagaccacgggaagcaaggcca
ggccccccaccagtcagaggaccccgaccaggagtgcgggaaggagagcagggagagtcg
tcggagattggccgcgtggtgaggtatccagacgctcaccagctctttgtaggaaacgtt
ccccatgatgtggacaaggcagagctcaaggagtttttccaacagtatggtactgtgctt
gagctacggatcaacagcggaggaaagcttcctaactttgggtttgtggtgtttgacgat
tcggaacctgtacagaaaatcctaagcaaccggcccattaagttcagaggcgatgtccga
ctgaacgtggaggaaaagaagactcgctccgcccgggaaggggatcggcgagacatccgc
cccagaggtccaggtggccccggagggccccgagagaggataggagggcccaggggcccc
cccaccaggggtggcatggcacagaaacccagctttggctctggacgaggtactggaccc
agtgaaggaggtcgctacatgggacctcgtcagtga
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