Oncorhynchus kisutch (coho salmon): 109865042
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Entry
109865042 CDS
T09179
Name
(RefSeq) protocadherin-11 X-linked-like isoform X1
KO
K16498
protocadherin delta 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
109865042
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oki01009
]
109865042
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109865042
Protein phosphatases and associated proteins [BR:
oki01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109865042
Cell adhesion molecules [BR:
oki04515
]
Cadherins
Protocadherins
109865042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
RibLong
Fibulin_C
TMEM154
DUF6249
DUF6377
Motif
Other DBs
NCBI-GeneID:
109865042
NCBI-ProteinID:
XP_031654503
Ensembl:
ENSOKIG00005023444
UniProt:
A0A8C7H8G6
LinkDB
All DBs
Position
LG19:61904175..62205994
Genome browser
AA seq
1255 aa
AA seq
DB search
MDLAGHAHVLVVLLTCLVLLSWAQEKDYTVREEQPENVRIGNLRKDLDLNLDPDFKLSSP
LQFKPVYKTGDVPLVRVEANTGEIFTTAHRIDREKLCSGVFNEKRCFYEIEVAVLPDEIF
RLVKIRFLIEDINDNAPLFQSTVINISIPENTAINTRYPVPSAFDPDVGINGIQHYELVK
SVSEFGLDIIETPEGDRWPQLIVQQSLDREQKDTFVMKIKVEDGGTPPKSSTAILQVTIS
DVNDNRPVFKDSEVEVNIPENAPIGTSVTQLHATDADLGSNAQIHFSFSNQISSSTKRHF
SIDSTTGLITVKQPLDREATPVHKLIVLASDGSSTPSRATVIVNVTDINDNVPSIDTRYI
MNLVNGTVLLSENAPLNTKIALITVTDKDSDLNGKVTCYTDHDVPFRLKPVFNDQFLLET
AAPLDYETTREYAIKIVASDSGKPPLNTSAMVLIKIKDENDNAPIFPQPEIQLSIPENND
PSTQLIKISATDADSGHNAEIIYSLGPDAPDGFNIDRRSGILSVGKRLDREKQEKYSFTV
MARDNGSTSLQSNVTVRLIVQDLNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDSDAG
DNSVITLSILNGKDNFLIDPQTGVIKPNLTFDREQQSSYTFMVKAIDGGQPPSTSYAKVT
INVVDVNDNRPVFVIPSSNYSYDLVQSTTSPGSVVTRVFAIDNDTGMNAELQYSIIGGSP
RGLFAIDKTTGNITLQEKIVSADQGLHRLVVKVKDLGQPESLHAIALIHLFINETVSNAT
FIQEQLRKSLETPLDRNVGDSEVTPQANGYVIVVIAIIAGTMTVILVIFVTALVRCRQTP
RHKVVQKGKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVTIEESKPDDPSQEHING
TLDLPVELDEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPMAPNKHHV
IQELPLDNTFVVGCDSHSKCSSTSSDPYSVSECSCQGGFKTSGQIHTRQNQGQTPEKSFS
SVASTCPHKEGCLLSKITSANTQRRVTFHLPDGSQESCSDSGLGDHEPSSTASTTQPLPL
GFPQEEYYQQTSPNSRTEGDGNSDPESTIVEVNLAKALAEASETCTQECLILGHSDSCWM
PPSLVTQFQSPSNTGTLPTLPSFGFQHQQSSPWARGAKADGRQCHTLGRSVPKDDLAKGM
NRPQFYNTLERHCSSKSKESDPIKVIPLASFSSSSSGQQTPANGGSSAFLHEHQL
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atggacttagcaggtcatgctcatgtgctggtggtgttactcacctgcctggtcttgctg
tcctgggcccaagagaaggactacacggtgagggaggagcagcccgagaatgtccgcatt
gggaacctacggaaggacttggacctgaaccttgaccctgacttcaagctgtcctcgcca
ctgcagtttaagcccgtctacaaaacgggcgatgtgcctttggtgagggtagaggccaac
accggggagatcttcaccacggctcaccgcatcgaccgagagaagctctgctcaggagta
ttcaacgagaagcgctgcttctacgagatcgaggtcgccgttctgcctgacgagatcttc
cgtctggttaagatccggttcctgattgaggacatcaatgacaacgctccactcttccag
tccaccgtaataaacatctccatcccagagaacactgccatcaacacccgataccccgtg
ccctctgcatttgacccagatgtggggatcaatgggatccaacactatgaacttgtcaag
agtgtaagtgagtttggcctagacatcatcgagaccccagagggagacagatggcctcag
ctgatcgtccagcagagcctggaccgcgagcagaaggacaccttcgtcatgaagatcaag
gtggaggacggaggtacgccacccaagtccagcacggccatcctccaggttaccatctcc
gacgtcaacgacaatcgaccggtcttcaaggacagtgaggtggaggtgaacatccctgag
aacgcccccattggaacctccgtcacccaactccacgccacagacgcagacctcggctcc
aacgcccagatccacttctccttctccaaccagatctcctcatccaccaagaggcatttt
tccatagacagcaccaccgggctgatcactgtcaagcagcccttagacagagaagccact
ccggtccacaaactcatcgtcctggccagcgacggcagctccactccctccagagctacg
gttatcgtcaacgtaacggacattaatgacaacgttccgtccatagacactcggtatata
atgaaccttgtaaatggaacggttctactgtcagagaatgctcctctcaacacaaaaata
gccctaattacagtgacggacaaggactcggatctgaacggcaaagtgacttgttacact
gaccatgacgttcctttcaggttaaagccagtctttaatgaccagttcctgctggagact
gcggcccccttagattacgaaacaaccagggaatatgcaattaagatagtagcatcggat
tcagggaagcctcctttgaacacgtcagcgatggttttaataaaaattaaggacgagaat
gacaacgctcccatcttccctcaacctgagattcagctgtccataccagagaacaatgat
ccatccacgcagctcataaagatcagtgccacggatgcagacagcggacataatgcagag
attatttattctcttggccctgacgctcctgatgggtttaacatagatagacggtcagga
atcctctccgttggcaaacgcctggatagagagaagcaggagaagtattcgttcactgtc
atggcaagggacaatgggtctacttcgttgcagagcaatgtcacagtgaggttaatagtg
caggacctcaacgacaacagcccagctttcacccatcctgagtataacttctacgtgcct
gagaacctgcctctgtacgggaccgtgggtctgatcaccgtcacagattctgatgcaggt
gacaactccgtcataacactgtccatcctgaatgggaaagacaatttccttattgatccc
cagaccggtgtaatcaaacccaacctcacatttgatagagagcagcagagctcatacact
tttatggtgaaggctatagacggagggcaaccacccagcacttcatacgccaaggtcacc
ataaacgttgtggatgtcaatgacaatcgacctgtttttgttatcccctcgtccaactac
tcttacgatctggtccagtctaccaccagccctgggtctgtggtcaccagggtgttcgct
atagacaatgacactggcatgaatgctgagctgcagtacagcatcattgggggatcacca
agagggctgtttgccatagacaaaacaactggcaatataactctgcaggagaagatagtc
tcagctgatcagggtttacacaggctagtggtgaaagtcaaagacctgggccagccagag
tccttacacgcaatcgccctcattcacctcttcattaacgagactgtatccaacgctacg
ttcattcaagagcagctacgtaagagcttggagactccattggaccgtaacgtgggagac
agtgaggtcacaccccaagccaacggatacgtgattgttgtcatcgctattatagctggg
actatgacagttatcttagtcatcttcgtgacggccttggtgcgctgccgtcagacgccc
aggcacaaagtggtgcagaagggcaagcagagcggcgagtgggtgtcgcccaaccaggag
aaccgtcaaatcaagaagaaaaagaagaaaaagaagagatcccctaagagcctcctcttg
aactttgtcaccatagaagaatccaagcctgatgatcccagccaggagcacattaatgga
actctggacctgcctgtggagctagatgagcagaccatggggaaatacaactgggccact
acgccgaccaccttcaaacctgacagcccagacttagccaagcattacaagtctgcctcc
ccccagccaaccttccaaatcaaaccagagaccccgatggcgcccaataaacaccacgtg
attcaggagctcccgctagacaacacgtttgtggtgggctgtgactcgcactccaagtgc
tcctccaccagctcagacccgtactcggtctcagagtgcagctgtcaggggggattcaag
acttctgggcaaatccacaccagacagaatcagggccagacaccagagaagtccttcagc
tcagtcgcatctacttgtccccataaggagggttgtcttctcagcaagataacgtctgca
aacacccagcgtcgtgtgacgttccacctcccggatggttctcaggagagctgtagcgac
agtggtctaggggaccacgagcccagcagcactgccagcaccactcagcctctccctctc
ggcttcccccaggaagagtactatcaacagacctcgcccaacagccgcaccgagggagac
ggaaactctgaccccgagtccaccatagttgaggtgaacctggccaaggcgctggcggaa
gcctcagagacgtgcacccaggaatgtctgatcctgggccactccgacagctgctggatg
cccccctccctggtgacccagttccagtctccgtccaacacgggtaccctgcctaccctg
ccctcctttggcttccagcaccagcagagctccccatgggccagaggagccaaggcggat
gggcgtcagtgccataccctgggcaggtctgtgcccaaagacgatctggctaaagggatg
aaccggccgcagttctacaacactctggaaagacactgcagcagcaagagtaaggagtct
gaccccatcaaggtcatccctctggcaagcttttcctcatcttcgtcaggccagcagacc
ccagccaacggaggatcctctgccttcttacatgagcatcagctgtaa
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