KEGG   Oncorhynchus kisutch (coho salmon): 109865054
Entry
109865054         CDS       T09179                                 
Name
(RefSeq) protocadherin-19 isoform X2
  KO
K16499  protocadherin delta 2
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oki04515]
    109865054
Cell adhesion molecules [BR:oki04515]
 Cadherins
  Protocadherins
   109865054
SSDB
Motif
Pfam: Cadherin Cadherin_2 PepSY ResB
Other DBs
NCBI-GeneID: 109865054
NCBI-ProteinID: XP_020308760
Ensembl: ENSOKIG00005027661
LinkDB
Position
LG19:45380126..45471698
AA seq 1105 aa
MYAKEMDFMQILWIVLLCWTGADSVINLKYSINEEQKAGYIIGNVTKDAQTQGFAIAPRA
PYLRVISNSEPRWVELSPAGLLLTHQKIDRDVACRQTSKCTVSLEVMSNSMEICVIKVEI
VDLNDNAPRFPTNHIDIEISENASPGTRFPLEGASDPDSGIFGVQSYSITPNELFGLEIK
TRGDGSKIAELVVQKSLDRETQSHYSYEISAEDGGDPPKIGAVQLNIKVMDSNDNNPVFD
QPVYTVNVMENSPINTLVIDLNATDPDEGTNGEVVYSFNSYVTEKTRDVFKIDPRTGIIT
VNGPLDYEATHIYEIDVQAKDLGPNSIPAHCKVTVNVMDANDNPPVISLLSVNTELIEVS
ENAPRGYVIALVRVSDKDAGANGKVQCRLQGNVPFRLQEYESFSTILVDGRLDREQRDTY
NLTIQAEDSGTPPLRATKSFVVKVTDENDNPPHFLKPHYQEMVLENNLPGSCLLAVSAVD
PDLGMNGTVSYTIVPSEIKHMDVNTYVSINPSGRIYSMRSFDHEYTRTFDFKVLARDQGN
PSLSSNATVRIVVLDVNDNTPVMTTPPLVNGTAEVSIPRNAGVGYLVTQVKADDYDEGEN
GRLTYTISEGDRPFFEIDQVNGEVRSTKMFGEQVKSTYEITVVARDHGKPSLSASAYIVV
YLSPDLNAQESIGPVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCSFFYL
RRVAEYSYGSQKKSSKKKLSKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQSLP
LGCRRSESTFLNVENQNSRNAAPNHGGYQQHPFASGQGPQQPDLIINGMPLPETENYIDS
SYVNSRAHLIKSTSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGHYIDTAVNDVLNMTVP
PNVCQLPDQDPSEGFHCQEECRILGHSDRCWMPRVPGPARGKSPEHGHPRNNVIALSIEA
TTVDVPHYEDCGTGTIKRTFATFGKDGPEDPERGELKGNKRTMMESQVCSPKANGGAVRE
AGNGREAASPITSPVHLKSPLAKVPSGYNTLRCRGAERIANHSMLRQPEGKDSEPAVREI
NTLLHDGSHLEKESPSSKRLKDIVL
NT seq 3318 nt   +upstreamnt  +downstreamnt
atgtacgccaaggaaatggattttatgcaaattctttggatagtccttttatgctggact
ggggctgattctgttatcaatttgaaatactcgataaacgaggagcagaaggctgggtat
atcattggaaacgtgacaaaggacgcacaaactcaaggatttgccattgcaccgcgtgcg
ccgtacttgcgggtcatctcaaattcagagccgcgatgggtggaactcagccctgctgga
cttctcctcacacatcagaaaatagaccgagatgtggcttgccgacagacgtcaaagtgc
actgtctctctggaggtgatgtcaaactccatggagatctgtgtgattaaagttgaaatt
gtggatttgaacgataatgcgcccaggttccccacaaaccacattgacattgaaatatca
gagaatgcctcccctggtaccaggtttcccctagagggggcaagcgatccggactctggg
attttcggtgtgcaatcatattcgatcaccccgaatgagctcttcgggttggagattaag
actaggggggacgggtccaagattgccgaactcgtagtgcaaaaatcgttagatagggag
acccagtctcactactcatacgaaatcagtgcagaagacggcggagaccccccaaagatt
ggcgcagttcagctcaatattaaagtaatggattcgaatgataataatcccgtttttgac
cagcctgtgtatacagtgaatgtgatggagaattctcctattaatacacttgtaattgac
ttgaatgcaacggatcctgacgagggaactaatggtgaggttgtatactcgtttaacagt
tacgtcaccgagaaaactagagatgtatttaaaatcgaccctagaaccggtattatcact
gtaaatggcccgttggattatgaagcaacccatatttacgagattgatgtccaagccaaa
gatttaggtccaaattctattccggctcattgtaaagtcacggtcaatgtgatggatgca
aatgataacccacctgtcattagtttattgtcggtgaacacagagctgattgaagttagt
gagaacgcgccacgtggatacgttattgcattagtaagggtctcagataaggacgctggc
gcgaatggtaaggtgcagtgtagactacaaggcaacgttcctttcaggctccaggaatac
gagagcttctcaaccatccttgtcgatggcaggctagacagagaacagagggacacgtac
aatctaactatccaagcagaggacagtggcaccccccctttacgtgccacgaagtcgttt
gtagtgaaagtcacagatgaaaatgataaccctccccacttcctaaaaccccattaccaa
gagatggtcctagaaaataacctgcccggctcatgtttgctggcagtgtctgctgtagat
cccgatttgggcatgaatggcaccgtttcatacaccatcgttcccagtgagattaaacac
atggacgtaaacacatatgtcagtataaatccttcagggcgtatttattccatgagatca
ttcgaccatgagtacactaggacttttgacttcaaagttttggccagggaccaagggaat
ccgtccttatccagtaacgcgacggtgcgcattgtcgttttggatgtgaatgacaataca
cctgttatgactactccacccctggtaaatggcaccgcggaagtatccattccaaggaac
gcaggggtgggttacctggtgacccaagtcaaggccgacgactacgacgagggggagaat
ggaaggctgacctataccatttcggagggagacaggcctttctttgagatagaccaggtg
aatggagaggtgcggtccaccaagatgttcggggagcaggtcaagtcgacctacgagatc
acagtggtggcacgcgaccacgggaaaccgtccttgtcggcctctgcatacattgttgtc
tacctctcaccggacctgaacgcccaggaatctattggaccagtaaacctgtcattgatt
ttcatcattgccctgggctctattgcagctatcctgtttgtcactatgatttttgtggca
gtcaagtgcaaaagggataacaaggagatccgaacgtacaactgcagtttcttctacttg
cgcagggtggcagagtactcgtatggcagccagaagaagtcgagcaagaagaagctgagc
aagaacgacatccgcctcgtgccgcgcgacgtggaggagacggacaagatgaacgtggtg
agttgctcgtctctcacctcctcgctcaactacttcgactaccaccagcagagcctgccg
ctgggctgcaggcgctccgagagcaccttcctcaacgtggagaaccagaactcgcgcaat
gccgcgcccaaccacggtggctatcagcagcatcccttcgccagcgggcagggtccccag
cagcctgacctcatcatcaacggcatgccgctgccagagacggagaactatatcgactcc
agctacgtaaacagccgagcacaccttatcaaaagcacatcgacattcaaggacctggag
ggcaatagtctgaaggacagtgggcacgaggagagcgaccagacggacagtgaacacgac
gtccagagaggccactacatagacacggctgtcaacgatgtgctcaatatgaccgtgccc
cccaacgtctgccagctgcccgaccaagaccccagcgaaggcttccactgccaggaagag
tgtcgtatcctgggccattcggaccgctgctggatgccccgtgtgcctggtccggcccgc
ggcaagtcgcctgagcatggccacccacgtaacaacgtcattgccctgtctattgaggcc
accaccgtagatgtgccccactacgaggactgtggcaccggcaccatcaaaaggactttt
gccaccttcggcaaggatggcccagaagaccccgagcggggtgagctaaagggcaacaag
cggacaatgatggagtctcaggtgtgcagccccaaggccaacggcggcgccgtgcgcgag
gcgggcaacgggcgcgaagcagccagtcccatcacctcccctgtgcacctgaagagcccg
ctggccaaggtgccatccggctacaacacgctcaggtgccgtggcgccgagcgcattgcc
aaccacagcatgctgcggcagcccgaggggaaggacagcgagccggccgtccgggagatc
aacactctcctccacgacggcagccatcttgagaaggagtctcccagcagcaagcgcctg
aaggacattgtgctctaa

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