Oncorhynchus kisutch (coho salmon): 109865054
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Entry
109865054 CDS
T09179
Name
(RefSeq) protocadherin-19 isoform X2
KO
K16499
protocadherin delta 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109865054
Cell adhesion molecules [BR:
oki04515
]
Cadherins
Protocadherins
109865054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
ResB
Motif
Other DBs
NCBI-GeneID:
109865054
NCBI-ProteinID:
XP_020308760
Ensembl:
ENSOKIG00005027661
LinkDB
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Position
LG19:45380126..45471698
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AA seq
1105 aa
AA seq
DB search
MYAKEMDFMQILWIVLLCWTGADSVINLKYSINEEQKAGYIIGNVTKDAQTQGFAIAPRA
PYLRVISNSEPRWVELSPAGLLLTHQKIDRDVACRQTSKCTVSLEVMSNSMEICVIKVEI
VDLNDNAPRFPTNHIDIEISENASPGTRFPLEGASDPDSGIFGVQSYSITPNELFGLEIK
TRGDGSKIAELVVQKSLDRETQSHYSYEISAEDGGDPPKIGAVQLNIKVMDSNDNNPVFD
QPVYTVNVMENSPINTLVIDLNATDPDEGTNGEVVYSFNSYVTEKTRDVFKIDPRTGIIT
VNGPLDYEATHIYEIDVQAKDLGPNSIPAHCKVTVNVMDANDNPPVISLLSVNTELIEVS
ENAPRGYVIALVRVSDKDAGANGKVQCRLQGNVPFRLQEYESFSTILVDGRLDREQRDTY
NLTIQAEDSGTPPLRATKSFVVKVTDENDNPPHFLKPHYQEMVLENNLPGSCLLAVSAVD
PDLGMNGTVSYTIVPSEIKHMDVNTYVSINPSGRIYSMRSFDHEYTRTFDFKVLARDQGN
PSLSSNATVRIVVLDVNDNTPVMTTPPLVNGTAEVSIPRNAGVGYLVTQVKADDYDEGEN
GRLTYTISEGDRPFFEIDQVNGEVRSTKMFGEQVKSTYEITVVARDHGKPSLSASAYIVV
YLSPDLNAQESIGPVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCSFFYL
RRVAEYSYGSQKKSSKKKLSKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQSLP
LGCRRSESTFLNVENQNSRNAAPNHGGYQQHPFASGQGPQQPDLIINGMPLPETENYIDS
SYVNSRAHLIKSTSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGHYIDTAVNDVLNMTVP
PNVCQLPDQDPSEGFHCQEECRILGHSDRCWMPRVPGPARGKSPEHGHPRNNVIALSIEA
TTVDVPHYEDCGTGTIKRTFATFGKDGPEDPERGELKGNKRTMMESQVCSPKANGGAVRE
AGNGREAASPITSPVHLKSPLAKVPSGYNTLRCRGAERIANHSMLRQPEGKDSEPAVREI
NTLLHDGSHLEKESPSSKRLKDIVL
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgtacgccaaggaaatggattttatgcaaattctttggatagtccttttatgctggact
ggggctgattctgttatcaatttgaaatactcgataaacgaggagcagaaggctgggtat
atcattggaaacgtgacaaaggacgcacaaactcaaggatttgccattgcaccgcgtgcg
ccgtacttgcgggtcatctcaaattcagagccgcgatgggtggaactcagccctgctgga
cttctcctcacacatcagaaaatagaccgagatgtggcttgccgacagacgtcaaagtgc
actgtctctctggaggtgatgtcaaactccatggagatctgtgtgattaaagttgaaatt
gtggatttgaacgataatgcgcccaggttccccacaaaccacattgacattgaaatatca
gagaatgcctcccctggtaccaggtttcccctagagggggcaagcgatccggactctggg
attttcggtgtgcaatcatattcgatcaccccgaatgagctcttcgggttggagattaag
actaggggggacgggtccaagattgccgaactcgtagtgcaaaaatcgttagatagggag
acccagtctcactactcatacgaaatcagtgcagaagacggcggagaccccccaaagatt
ggcgcagttcagctcaatattaaagtaatggattcgaatgataataatcccgtttttgac
cagcctgtgtatacagtgaatgtgatggagaattctcctattaatacacttgtaattgac
ttgaatgcaacggatcctgacgagggaactaatggtgaggttgtatactcgtttaacagt
tacgtcaccgagaaaactagagatgtatttaaaatcgaccctagaaccggtattatcact
gtaaatggcccgttggattatgaagcaacccatatttacgagattgatgtccaagccaaa
gatttaggtccaaattctattccggctcattgtaaagtcacggtcaatgtgatggatgca
aatgataacccacctgtcattagtttattgtcggtgaacacagagctgattgaagttagt
gagaacgcgccacgtggatacgttattgcattagtaagggtctcagataaggacgctggc
gcgaatggtaaggtgcagtgtagactacaaggcaacgttcctttcaggctccaggaatac
gagagcttctcaaccatccttgtcgatggcaggctagacagagaacagagggacacgtac
aatctaactatccaagcagaggacagtggcaccccccctttacgtgccacgaagtcgttt
gtagtgaaagtcacagatgaaaatgataaccctccccacttcctaaaaccccattaccaa
gagatggtcctagaaaataacctgcccggctcatgtttgctggcagtgtctgctgtagat
cccgatttgggcatgaatggcaccgtttcatacaccatcgttcccagtgagattaaacac
atggacgtaaacacatatgtcagtataaatccttcagggcgtatttattccatgagatca
ttcgaccatgagtacactaggacttttgacttcaaagttttggccagggaccaagggaat
ccgtccttatccagtaacgcgacggtgcgcattgtcgttttggatgtgaatgacaataca
cctgttatgactactccacccctggtaaatggcaccgcggaagtatccattccaaggaac
gcaggggtgggttacctggtgacccaagtcaaggccgacgactacgacgagggggagaat
ggaaggctgacctataccatttcggagggagacaggcctttctttgagatagaccaggtg
aatggagaggtgcggtccaccaagatgttcggggagcaggtcaagtcgacctacgagatc
acagtggtggcacgcgaccacgggaaaccgtccttgtcggcctctgcatacattgttgtc
tacctctcaccggacctgaacgcccaggaatctattggaccagtaaacctgtcattgatt
ttcatcattgccctgggctctattgcagctatcctgtttgtcactatgatttttgtggca
gtcaagtgcaaaagggataacaaggagatccgaacgtacaactgcagtttcttctacttg
cgcagggtggcagagtactcgtatggcagccagaagaagtcgagcaagaagaagctgagc
aagaacgacatccgcctcgtgccgcgcgacgtggaggagacggacaagatgaacgtggtg
agttgctcgtctctcacctcctcgctcaactacttcgactaccaccagcagagcctgccg
ctgggctgcaggcgctccgagagcaccttcctcaacgtggagaaccagaactcgcgcaat
gccgcgcccaaccacggtggctatcagcagcatcccttcgccagcgggcagggtccccag
cagcctgacctcatcatcaacggcatgccgctgccagagacggagaactatatcgactcc
agctacgtaaacagccgagcacaccttatcaaaagcacatcgacattcaaggacctggag
ggcaatagtctgaaggacagtgggcacgaggagagcgaccagacggacagtgaacacgac
gtccagagaggccactacatagacacggctgtcaacgatgtgctcaatatgaccgtgccc
cccaacgtctgccagctgcccgaccaagaccccagcgaaggcttccactgccaggaagag
tgtcgtatcctgggccattcggaccgctgctggatgccccgtgtgcctggtccggcccgc
ggcaagtcgcctgagcatggccacccacgtaacaacgtcattgccctgtctattgaggcc
accaccgtagatgtgccccactacgaggactgtggcaccggcaccatcaaaaggactttt
gccaccttcggcaaggatggcccagaagaccccgagcggggtgagctaaagggcaacaag
cggacaatgatggagtctcaggtgtgcagccccaaggccaacggcggcgccgtgcgcgag
gcgggcaacgggcgcgaagcagccagtcccatcacctcccctgtgcacctgaagagcccg
ctggccaaggtgccatccggctacaacacgctcaggtgccgtggcgccgagcgcattgcc
aaccacagcatgctgcggcagcccgaggggaaggacagcgagccggccgtccgggagatc
aacactctcctccacgacggcagccatcttgagaaggagtctcccagcagcaagcgcctg
aaggacattgtgctctaa
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