Oncorhynchus kisutch (coho salmon): 109865296
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Entry
109865296 CDS
T09179
Name
(RefSeq) ATP-dependent RNA helicase DDX39A-like
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109865296
Enzymes [BR:
oki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109865296
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109865296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
109865296
NCBI-ProteinID:
XP_031655216
Ensembl:
ENSOKIG00005023816
UniProt:
A0A8C7HD35
LinkDB
All DBs
Position
LG20:44552805..44561326
Genome browser
AA seq
427 aa
AA seq
DB search
MAENDVDNELLDYEEDEEPQVAPETATPAGKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPTVKAAVFFGGLSIKKDEDALKKNCPHIVVGTPGRILALIR
NKTLNLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDETDAKTLNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaacgacgttgacaacgagctgttggactatgaagaggatgaggagcctcag
gttgccccggagaccgccacacctgcgggcaagaaggaggtaaagggctcttatgtctcc
attcacagctccggcttccgagacttcctgctcaaaccagagctgctccgcgccattgtt
gactgtggctttgaacatccctctgaagtccagcatgagtgcatcccacaggccatcctg
ggcatggacatcctgtgccaggccaagtctggtatgggcaagacggctgtgtttgtactg
gccaccctgcagcagattgagcctgtggacgggcaggtgtctgtgctggtgatgtgccac
acacgagagctggccttccaaatcagcaaagagtatgagcgcttctccaagtacatgcct
accgtcaaggcagccgtgttcttcgggggcctgtccatcaagaaggacgaggacgcgctg
aagaagaactgcccccacattgtggtgggaacgcccggccgcatcctggccctcatccgc
aacaagaccctcaacctgaagaacgtgaagcactttgtcctagacgagtgtgacaagatg
ctggagcagctggacatgaggcgtgatgttcaggacatcttcaggctcacaccccacgag
aagcagtgcatgatgttcagcgccaccctaagcaaagagatccgtcctgtctgccgcaag
ttcatgcaggatcccatggaggtgtttgtggacgatgagaccaagctgacgctgcacggc
ctgcagcagtactactgcaagctgaaggatagcgagaagaaccgcaagctcttcgacctg
ctcgacgtgctcgagttcaaccaggtggtgatctttgtgaagtctgtgcagcgctgtgtg
gctctgtctcagctgctggtggagcagaacttccctgcaatcgccatccacaggggcatg
gcccaggaggagagactttcccggtaccagcagtttaaggacttccaaaggcggatcctg
gtggccaccaacctgtttggccgagggatggacattgagcgcgtcaacatcgtcttcaac
tacgacatgcctgaggattccgacacctacctgcacagggtggcccgtgcaggcaggttc
gggacgaaaggtctggccgtgacctttgtgtctgacgagactgacgccaagaccctgaac
gatgtgcaggaccgcttcgaggtcaacgtggcagagctcccagaagagattgacatctcc
acctacattgaacagtccagatga
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