Oncorhynchus kisutch (coho salmon): 109865440
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Entry
109865440 CDS
T09179
Name
(RefSeq) transcription factor 7-like 2 isoform X1
KO
K04491
transcription factor 7-like 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04310
Wnt signaling pathway
oki04520
Adherens junction
oki04916
Melanogenesis
oki05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109865440
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
109865440
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
109865440
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109865440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109865440
Transcription factors [BR:
oki03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
109865440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109865440
NCBI-ProteinID:
XP_020309204
Ensembl:
ENSOKIG00005036906
LinkDB
All DBs
Position
LG20:17817590..17933526
Genome browser
AA seq
645 aa
AA seq
DB search
MPQLNGGGGDDLGANDEMISFKDEGEQDEKISENLSAERDLADVKSSLVNESETNQNSSS
DSEAERRPPPRSETFRDKTRESLEEAAKRQDGGLFKSPPYPGYPFIMIPDLTSPYLPNGS
LSPTARTYLQMKWPLLDVNHGSLQSRQALKDARSPSPAHIVGPFCLEFPGQSDLSLHQFQ
LSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLQGDVDPKTGIPRPPQHPDISPYY
PLSPGAVGQIPHPLGWLVPQQGQPVYQGFRHPYPTALTVNASMQSFLSSRFPHHMVPPHH
SLHQTGIPHPAIVTPNVKQESSHSDIGLNSSTILYTLHRKHQDSKKEDEKKKQPHIKKPL
NAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALTREEQAKYYELARKERQLHMQLY
PGWSARDNYAANQQGKKKKRKRDKQPGEGNEHREYFPNPCLSLPPITDLSAPKKCRARFG
LDQQNNWCGPCRRKKKCIRYIQGEGSCASPPSSDGSLLDSPPSSPSSVAPSPSSKESRPQ
TEQMQPLSLTMKPAHQPLHYPHRHLLPGHPPPPSLVLLGNSAAAAGKTPGAAHNGARGDV
SSSRQPGSSGAALARPLAASLCHSRSLHPNSTAPQPLSLVTKSIE
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagctcaacggcggtggaggggacgatttgggtgcgaacgatgaaatgatttcc
ttcaaagacgaaggggagcaggatgaaaaaatctcggagaatttatcagcagaaagggat
ttagcagatgtcaaatcttctcttgtaaatgaatcagaaacaaatcaaaacagctcgtcg
gattcggaggcggaaagacggcctccgcctagatctgaaactttcagagacaaaacaaga
gaaagtttagaggaggctgcgaaaaggcaagatggagggctgttcaagagcccaccgtac
ccgggctatccatttataatgatccccgatcttacaagcccgtaccttccgaatggatca
ctttctccaacagctcgcacatacctacagatgaaatggcccctgctcgatgttaaccac
ggaagtcttcaaagtagacaagcacttaaagatgcccggtccccgtcaccggcacacatc
gttgggcccttctgcttggaattccccggacagtcagatctgagccttcaccaatttcag
ttgtctaataaagtcccagtggtacagcaccctcaccacgtgcacccgctcacgcctctg
atcacctacagcaatgaacacttcacaccgggcaacccccctccgcacctacagggagat
gtggaccccaaaacaggaattccaaggcctccacaacacccagacatatctccctattac
cctctctcacctggtgctgtcggccagatcccccatccgctagggtggttagtaccacag
caaggtcaacctgtttaccagggttttaggcacccctacccgactgcgctcactgtcaac
gcatccatgcaaagttttctgtcctccaggttccctcaccacatggtcccccctcatcac
agtttgcaccagaccggcatcccccaccccgccatcgtcacgcccaacgtcaagcaagag
tcctcccacagcgacatcggcctcaacagctctactatactgtacacactccacaggaaa
caccaggactcgaaaaaggaggacgagaagaagaagcagccccacatcaagaagccgctg
aacgccttcatgctctacatgaaggagatgagggccaaggtggtggccgagtgcacgttg
aaagagagcgccgccatcaaccagatactgggacgaaggtggcacgccctaacgcgagag
gagcaggcgaaatactacgagctggccaggaaagagcgacagcttcacatgcagctctac
cccggctggtctgcacgagataactatgcggctaaccaacagggcaagaagaagaagagg
aaacgggataagcagccaggagagggcaatgaacacagagaatattttccaaacccttgc
ctttcactccctccgattacagacctgagcgctcctaagaagtgtcgagcgcgctttggg
ctcgatcagcagaataactggtgtggcccgtgcaggagaaaaaaaaagtgcattcgctac
atccaaggtgaaggtagctgtgccagtcctccctcttcggacggcagcttactagactcc
cccccatcctccccctcctcggtggccccctccccctcctcgaaagagtccagacctcag
actgaacaaatgcaacctctctcactgactatgaaaccggcccaccagcctctccactac
ccgcaccggcacctcctgcctgggcatcctcctccgccatctttggttctgctgggaaac
tctgctgctgcagcgggcaaaacgcctggcgcagcccacaacggagcgcgcggcgacgtc
tcgtcctcgcggcagccgggctcctcgggcgccgccctggccaggcccttggcagcatcg
ctgtgtcattcccgctcgctacaccccaactccacggcccctcagcctctgtcgctcgtt
accaagtctatagagtag
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integrated database retrieval system
