Oncorhynchus kisutch (coho salmon): 109865486
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Entry
109865486 CDS
T09179
Symbol
rab11fip3
Name
(RefSeq) rab11 family-interacting protein 3 isoform X2
KO
K12485
Rab11 family-interacting protein 3/4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109865486 (rab11fip3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109865486 (rab11fip3)
Membrane trafficking [BR:
oki04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
109865486 (rab11fip3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rab11-FIP3
RBD-FIP
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
2-thiour_desulf
ZapB
EF-hand_9
SAPC2_N
Motif
Other DBs
NCBI-GeneID:
109865486
NCBI-ProteinID:
XP_020309306
Ensembl:
ENSOKIG00005025727
UniProt:
A0A8C7HPF8
LinkDB
All DBs
Position
LG20:22334943..22380381
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AA seq
1075 aa
AA seq
DB search
MEQTLMSSPLGHSEWDPEGTSSHGFILLDSDKGAIMPQRKGGQTALDFQKVDQDVSLCLE
ELFQENALNLDSLFRTSSYSGGDKILPWEGDQSNHSQDVPLDKPLELSPLKDKIEEHNNV
SDSPLPWLLFSKTTDLLRDDSVCEELNSLQDPPVSYTDSVNSHKELITLSEPPSPVKVSN
RTPDTNTETSSLLVDHLSSENFTFPPSPAPSGEVNPQGVSKELLLLSLDEDSGFPPPLQG
GETVSPETGDKGLFLEPVTDLPTVSNSTPEGLPESSFSHNNIHTDCARESPGVQVGSVPL
LDLEIPDCDSSLSLCPTPLESPTCTGASPAEDSEQEHTLATSILTLSEHRGEGDSSLLLN
SSPSIEPPSPKFLSNRDASVLGQLPSGCSSEENGPQDLMEDKIIFDFTKHEGEEEMALDQ
CLTSDVLPDEETWDLKPPEAVQGDSVPALQTEQRDGERLADLDLFAGTTGCHKRDSFDCP
VLELNGLSSDSGWTSEQTVETLSLSKMVGSDSMVPIVNQREEDPSPLKAVFDALDQDGDG
FVRIEEFMEFAAAYGADQVKDLTKFLDPSGLGVISFEDFHRGISAISNGGTEPQLYDVHF
SPGDGAVGCSEEYDEQNEVTDSAYLGSESTYSECETFTDEDTGALVQPEMHEDVETDSGI
EATLHDPEDSSNRFSLSSELHSHTLVTVIGGDEEHFEDFGESNTSELLLDTTEEGTEGEG
DSSHLQTPDQSNCSSLLLSPSSSKRLSSKKVARHLLQNSSMTLDSMSELSRDILDLADTD
ITDKVLLLERRVAELEKDSEASGEQHARLRQENLQLVHRANALEEQLKEQELRAEDHLHQ
ETRRHKDALTKLERERGLELENLQARLQQLDEENSELKSCVPCYRANIERLEEEKRKLED
EVEDVTERMNEELETRRKTTDKLTHERHQNQKEKEHTQELIEDLRKQLEHLQLYKLEAEA
RRGRSPSAGLQEYQSRTREAELEQEIRRLKQDNRSLKEQNDELNGQIINLSIQGAKNLVT
ASFSESLAAEINSVSRGELMEAIRKQEDVNFRLQDYIDRIIVAIMESNPSMLEVK
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggaacagactctgatgtctagccctctggggcattctgagtgggatccagaaggcaca
agctcccatggattcatcctcttggattcagacaaaggagccataatgcctcagagaaaa
ggtggtcagacagctttggatttccagaaagttgaccaggatgtatctctatgcctggaa
gagcttttccaggagaacgccttaaatttagacagtcttttcaggacctccagttactct
ggtggagacaagattttgccatgggagggagatcaatctaatcattctcaagatgttccc
ctggacaaacctctagagttatcacctctcaaagacaaaattgaggaacataacaatgta
agtgacagtcctctaccttggctgttattctccaaaaccactgatttgctcagggacgac
tcagtgtgtgaggaactaaattccctgcaagatccacctgtgagttacacagactctgtt
aacagtcacaaggagctgataaccctcagtgaacctccttctcctgtgaaggtttcaaat
aggactccagataccaacacagagacttcctctttgttggtagatcacctctcatctgaa
aacttcaccttcccccccagccctgccccttcaggtgaggtgaacccacagggtgtcagt
aaggagcttttactcctgtcactggatgaggacagtggcttccctcctcccttacagggc
ggggagactgtgtcacctgaaaccggggacaaaggtttattcctggaacctgtgactgat
ctacccacagtcagtaacagtacccctgaaggtttacctgagagcagcttctcacacaac
aacatccatactgactgcgctagagaatctccaggggttcaggtgggatctgtgcctttg
ctggatctggagattcctgactgtgacagcagcctcagcctctgccctactcctcttgag
tcaccaacctgcacgggtgcatcacctgcagaggattcagagcaggaacacactttggct
acttcaatcctgactctatcagagcacagaggtgagggggactcgtccctccttctgaac
tcttcaccatcgattgaacccccgtcgccaaagttcctctccaacagagatgcttcggtc
cttggtcaactgcccagtggctgcagctccgaggagaatggcccccaagatttgatggaa
gacaaaattatctttgattttaccaaacatgagggagaggaggaaatggctctggatcag
tgcttgacctcagacgtgctgcccgatgaggaaacgtgggacttgaaaccacctgaggct
gtacagggtgacagtgttcctgccttacaaactgaacagcgtgatggggaaaggttggca
gacttggacctgtttgccggaaccacgggttgtcacaaacgtgatagttttgattgccca
gttctggagttgaatggtttgtcttctgattctggatggactagtgaacaaacagtagag
acgctgtcactctctaaaatggtggggtctgactccatggtccccatagtgaatcagaga
gaggaagacccatcacctctgaaggcagtgtttgatgctctggaccaggacggtgatgga
tttgtacgcattgaggagtttatggagtttgctgctgcctatggggctgaccaggtgaag
gatctgaccaagttcctggatccaagtgggctgggggtgatcagcttcgaggacttccat
cgaggaatctcggccatcagcaatggagggacagagccccagctctacgatgtgcacttc
agcccaggggacggagccgtgggctgctcagaggagtacgatgagcaaaacgaggtgacg
gacagtgcatacctgggctcggagagcacttacagcgagtgtgagacgttcaccgacgag
gacacgggagccctggtccagcccgagatgcacgaggatgtggagacggacagcggcatc
gaggccacgctccacgacccagaggacagtagcaacaggttctccctgagctctgagttg
cacagccacaccctggtgacagtgattggcggggatgaggaacattttgaggactttggg
gagagcaacacctcggagctgttgctggacaccactgaggagggaaccgagggagagggg
gactcatcccacctccagacccccgaccagagcaactgctcctccctgctactctctccc
agctccagcaagaggctgtccagcaagaaagtagcacgacacctcctccagaacagctcc
atgacgctggacagcatgagtgagctgtcccgtgacatactggacctggctgacaccgac
atcactgacaaggtgctcctactggagcgtcgcgtggcggagctggagaaggactcggag
gctagcggggagcagcacgcgcgcctccgccaggagaacctgcagctggtgcaccgggcc
aacgccctggaggagcagctcaaggagcaagagctccgcgctgaggaccacctgcaccag
gagacccgccgccacaaggacgccctcaccaagctggagcgggagaggggcctggagctg
gagaacctgcaggctaggctgcagcagctggatgaggagaacagtgagctgaaatcctgt
gtgccctgttaccgcgccaacatcgagagactagaggaggagaagaggaagctggaagac
gaggtggaggacgtgacggagcggatgaacgaggagctggaaacccggaggaagacgacc
gacaagctgacccacgagcgccaccaaaaccagaaggaaaaggagcatacgcaggagctg
attgaggacctgcggaagcagttggagcacctgcagttgtacaagctggaggcagaggct
aggagaggacgctctcccagtgccgggctgcaggagtaccagagccgcacccgcgaggcc
gagttggagcaggagatccgacgcctcaagcaggacaaccgcagtctgaaggagcagaac
gatgagctgaacggccagatcatcaacctgagcatccagggagccaagaacctggtgacg
gcctccttctccgagtcgctggctgccgagatcaactctgtgtcccggggagagttgatg
gaggccatccgcaagcaggaggacgtcaacttccgactacaggactacatcgaccgtatc
atcgtggccatcatggagtccaacccctccatgctggaagtcaagtag
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