Oncorhynchus kisutch (coho salmon): 109865496
Help
Entry
109865496 CDS
T09179
Symbol
nlrc3
Name
(RefSeq) NLR family CARD domain-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oki04054
]
109865496 (nlrc3)
Pattern recognition receptors [BR:
oki04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
109865496 (nlrc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
CARD
AAA_16
LRR_12
Motif
Other DBs
NCBI-GeneID:
109865496
NCBI-ProteinID:
XP_020309317
Ensembl:
ENSOKIG00005025523
LinkDB
All DBs
Position
LG20:complement(22082813..22105622)
Genome browser
AA seq
1135 aa
AA seq
DB search
MERNTHYNSILDRNKRIAWQEDCYVDLQSTPTSTSTKGEMEDVGWIQKHQGHLQRFITTP
LLEGALSHMRKLELLSQGEEAQVQAGGQLQERVSTLTSILASMDPQGSNALQAFLENSDS
QMYRLITMHDPMVQEHKEALLLQYPTPSDSLSPGPCSPEFSSSRILLLVDGLSDLQQKEH
DLMQVEATRGARRHHVRQLALAKLLEPLTRVSLPPRVSLTVGVAGIGKSTLVGHFVRLWS
RGEICTDVSFVLPFAFWELNTGEKLSAERLVKLAFPHMTDPSLVLSGTCRTLLIFDGLDE
FRCPLDFSETVPCTDPKKEVSVDDLVTNIIRGNLLPEAAVWVTSRPAVASLIPGGLVDRL
TEIPGFSPKEIRLFLNYTFPKGDTASQIWTHLESNKIFMVMSYMPCICWIVAVTFGYLLE
SGWQEGLPRTCTELYSHFCAMRAEAGEPRGREPIKMDQLNGNNRKLLGSLGRLAFYGLLK
HKYTFSEQDMRAYGVDLPSTQGGLGTGVLIREESPSCVAYRFTHLTVQEFLAATYYHICS
KRAIFDLFSESAMSWPKIGFQNHFRSALQRSQQAEDGHLDVFVRFLAGLLCPAAVRPLAG
LLAQGKDDGGQRVWAAGLLQDLLGSGGAVVSLRSVNVAYCLQELQHTEVLRSVEEDLRCG
GLGWKLTRTHCTALAYLLQVSPECSEETNLSACLDYSTVKSLLPQLLYCSHLRLENNHFK
DDVMELLGSLLSAKDCHLQKISLAENAISNKGAKALSRALLVNRTLITLDLRSNNIGSKG
AKFLAEALKMNQVLVSINFQNNLIEEEGARALAEVLLSNRKLVSLNVQKNCIGADGAKRI
AEALKTNRTLTELILSSNQLGDKGTAALAQALTVNHSLHSLHLQSNSISNKGMTALTKAL
RLNRGLICLNLRENSIGVEGAKDMARALQENSSLQHLDLTANLLHDEGVKAIAGAVKVNR
ALTTLRLQWNFIKCTATKSLAHALLTNSTMQLLDLQENAIGDEGVVALAGALKTNTSLCT
LCLQGVSAGRSGAISMAEALMVNKTLHTLDLRGNSIGMEGAKALANALKTNRTLKSLNLQ
ENSLGMDGAIFIATALKGNHQLTYINLQGNGIGESGAKVISDAIRTNSPDCVVEI
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaaacacccattacaattctattctggacagaaacaagcgtatcgcatggcaa
gaggactgctatgttgacctccagtctacccccacctcaacttccaccaagggagagatg
gaagatgtgggctggatccagaaacatcaggggcatctgcagcgcttcattaccactccc
ctcctggagggggcgttgtcccacatgaggaagctggaactgctgagccagggtgaggag
gcccaggtacaagctggggggcagctgcaggagcgggtgagcacccttacctccatcctg
gccagcatggacccccagggctccaacgctctccaggccttccttgagaactctgactcc
cagatgtacaggctcatcacgatgcacgatcccatggttcaggagcacaaggaggctctt
ctgttgcagtatcccacaccaagtgacagcctctcccctggcccctgtagcccagaattc
tcctcctccagaatcttgctcctggtcgacggcctatcggacctccagcagaaggagcat
gacctcatgcaggtggaggccacccgtggggcgcggagacaccacgtcagacagctggcc
ctggccaaactcctggagcccctcacacgggtcagcctgccccccagggtctcactcact
gtgggagtggccggcatcggcaagagcacccttgtgggacattttgtacgcctttggagc
agaggtgagatctgcacagacgtgagttttgtcttgccctttgccttctgggagctgaac
actggggagaagctgtcggccgaaagactggtgaagctggccttccctcacatgacggac
cccagcctggtgctgagtggtacatgtcggacattgctgatcttcgacggtctggacgag
ttccgttgtcctctggacttctcggagactgtgccttgcacagaccccaagaaggaggtg
tcggtggacgacttggtcaccaacatcatccggggcaacctgctccctgaagcagcggtg
tgggtgacctccaggccggcggtggcctcgttgattcctgggggactagtggacaggttg
accgagatccccggattcagcccgaaggaaattcggctgttcctgaactacaccttccct
aagggagatactgccagtcagatatggactcacttggagtccaacaagatcttcatggtg
atgtcttacatgccttgcatttgctggatagtggcggttacctttgggtacctgttggag
agtggctggcaggagggccttcccaggacctgcactgagctctactcccacttctgtgct
atgagagctgaagcaggtgagcccagaggcagagagcctatcaagatggaccagcttaac
gggaacaaccgcaagctgctgggaagtctgggccgactggccttctacggacttctgaag
cacaaatacaccttcagtgagcaggacatgagggcctatggagtagaccttccatccacc
cagggtggcctcggaactggagtactgatccgcgaagaatccccgagttgtgtggcctac
cgcttcacccacctgactgtgcaggagttcttagcagccacgtattaccacatctgctcc
aaacgtgccatctttgacctgttcagcgagagcgccatgtcctggcccaagatcggcttc
cagaaccacttcaggagcgccctgcagcgatcccagcaggcagaggatggtcacctggat
gtgtttgtgcgattcctggcggggttgctgtgtccagcagcagtgcggccgctggcaggc
ctgctggcccaggggaaggacgatgggggccaaagggtttgggcagcagggctgctgcag
gacctcctgggcagcggtggtgctgtggtgtcactacgctcagtgaacgtggcctactgc
ctgcaagagctgcagcacacagaggtgctacgcagcgtggaggaggacctgcgctgtggc
ggcctgggatggaagctgacacggacacactgcacagcgctggcctacctgctacaggtg
tctccagagtgcagcgaggagaccaacctgtcggcatgtctggactactccactgtcaaa
agcctgctgcctcagctgctctactgcagccatctcagattggaaaataaccattttaaa
gatgatgtcatggaactgctgggaagcttactgagtgcaaaggactgccaccttcagaag
ataagtctggcagagaacgctatcagcaacaaaggggccaaggccctgagtcgagcacta
ctggttaaccggacgctaattacacttgatctccgtagcaacaacattggatctaaaggt
gccaagtttctagcagaagccctcaaaatgaatcaggtcctggtgtccatcaatttccaa
aataatctcattgaggaggagggcgctcgggccctggctgaggtgctgctgtccaaccgc
aaacttgtctcgctgaatgtacagaagaattgtattggagcagatggagccaagaggatt
gcagaagcgctaaagacaaaccggacacttacagaactgattctgagcagtaaccagctg
ggggacaaaggcactgcagccctggcccaggccctgaccgtcaaccacagcctccactcg
ctgcacctgcagagtaactccatcagtaacaaagggatgactgcgttaaccaaggctctg
cggttgaaccgtggactcatctgtctgaacctgcgcgagaactcaatcggggtggagggg
gcgaaggatatggccagggcactgcaggagaacagctctctccagcacctggatcttaca
gccaacctgctgcacgatgagggggtgaaagccatagctggagctgtgaaggtcaaccga
gcgcttactactttacgtctccagtggaatttcatcaagtgcacagccactaaatccttg
gcccacgccctactcaccaactccaccatgcagctactagatctacaggaaaatgccatt
ggggatgaaggagtggtagctctggcaggagccctgaagaccaatacgtctctctgtaca
ttgtgtctccagggtgtatcagcaggcaggagtggagccatctcaatggccgaggctcta
atggtcaacaaaaccctgcacactctggacctacgagggaactccataggaatggaggga
gccaaggctttggctaatgcactgaagacaaacagaacactcaaatcattaaatctgcag
gagaactctctgggaatggatggagccatattcatcgccacagccctgaaaggaaaccac
cagctaacttatataaacttgcaggggaacggcatcggagagtcgggagcaaaggtaatc
tctgatgccatcagaaccaactctccagactgtgtggtggagatctga
DBGET
integrated database retrieval system
