Oncorhynchus kisutch (coho salmon): 109865503
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Entry
109865503 CDS
T09179
Name
(RefSeq) leucine-rich repeat-containing protein 4B-like
KO
K16360
netrin-G3 ligand
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109865503
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109865503
Cell adhesion molecules [BR:
oki04515
]
Immunoglobulin superfamily
NGL family
109865503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
Ig_2
LRRNT
DUF7617
Ig_6
Motif
Other DBs
NCBI-GeneID:
109865503
NCBI-ProteinID:
XP_020309332
Ensembl:
ENSOKIG00005029522
LinkDB
All DBs
Position
LG20:23626075..23639613
Genome browser
AA seq
752 aa
AA seq
DB search
MRVVMVTSPSTPSPLLWLVQILLWLHHHGPQVTEAAPPCPNPCSCSNQASRVICTRKSLV
EVPDSISVNTRYLNLQENTIEVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPAYAFHRVPSLRRLDLGELRKLDYI
SEAAFEGLFNLRFLNLGMCGLKEIPNLTPLVRLEELELSGNQLGNVRPGSFQGLVSLRKL
WLMHSKVTVIERNAFDDLKNLEELNLSHNTLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPGLKGRYIGELDQSHFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTATAVLNVSTSDSSNPFSYFTTVTVETVETNNGEDSAARQYINETYVPPDYLG
PTVSGGVLGKGRAGFTISPSRSSLSSLSPRATRATEKAVTVSIMEVTNIPGLDDVMKTTK
IIIGCFVAITFMAAVMLVVFYKLRKQHQLHKHHGPTRAIEIINVEDEMGAGAGSGISGGS
TMQSGCGGDGTLRMHHPEIVNLPNIGRSEHLNHYYKANHFNNNVMGLSIGTGAGISTLSN
KNNPSPLNQQGQDIPISCTQVPISSATFQTMSGNGANTNPLSVSPPLPMSLPMSPMGLHG
SIKGFMGQNQNPQMEPLLFKGNSKENVQETQI
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttgtcatggtgaccagcccctccaccccttcccccctcctctggttggtccag
attttactgtggctccaccaccatggacctcaggtaacagaggccgctcccccatgtcca
aacccctgtagctgctccaatcaggcaagccgagtcatctgtacaaggaagagtttggta
gaagtcccggacagtatttctgtgaacacaagataccttaacctacaagagaacacgatt
gaggtgataaagtctgacacattcaagcacctgcggcatttggaaatcctgcagctttcc
aagaaccacatcagacaaatcgaggtgggcgcgttcaatggcctacccaacctcaacacc
ctggagctcttcgacaaccgccttacgctggtaccgtcgcaggcctttgagtacctcagc
aagctgcgggagctctggctacggaacaaccccatcgagacactgcctgcgtacgctttc
caccgcgttccctccctgcgccgtctcgacctgggcgaactacggaagttggactacatc
tctgaggctgccttcgagggcctgttcaacttgcgtttcctgaacctgggcatgtgcggt
ctgaaggaaatacccaacctcacacccttggtccgactggaggagctagagctgtctggc
aaccagctggggaatgtccggcccggctcgttccaaggcctggtgtcgctgcgcaaactg
tggctcatgcactccaaggtgacggtcattgagcgcaatgccttcgacgacctgaagaac
ctggaggaactcaacctgtcccacaacaccttgcactcgctgccccacgatctcttcacc
ccgctgcaccagttggagcgggtgcacctcaaccacaacccctgggtgtgcaactgcgat
gtcctgtggcttagctggtggctgaaggagacggtgcccagtaacaccacatgctgtgcc
cgctgccacgcgcccccaggcctgaagggccggtacattggtgagctggaccagagccac
ttcacatgctacgctcctgtcattgtagagccacccactgacctcaatgtcacagagggc
atggctgctgagctgaagtgtcgcactggcacctccatgacgtctgtcaactggctcacc
ccaaatggcaccctcatgacgcatgggtcgtaccgcgtcaggatctcagtccttcacgat
ggaaccctgaatttcaccaatgtgactgtgcaggacacgggccaatacacctgcatggtg
accaactccgccggcaacactacggcaaccgcagtgctcaacgtgtctacctcagactcc
agcaaccctttcagttacttcaccaccgtcactgtggaaaccgtggaaactaacaatggg
gaggattctgctgcaaggcagtacatcaacgaaacctacgtaccgccagattacctgggt
ccaactgtttcaggaggggtactgggtaaaggcagggctggattcaccatatctccatct
cgctcatctctctcctctctgtccccgcgagccaccagagccactgaaaaggcagtcaca
gtgtcgataatggaggtcacgaacatccctggcctggacgacgtgatgaagaccacaaag
atcatcattggctgcttcgtggccatcaccttcatggcggccgtgatgctcgtggtcttc
tacaagctgaggaagcagcaccagctgcacaagcaccatggccccacccgcgccatcgag
atcatcaacgtggaggatgagatgggtgccggggccgggagcggcatctcagggggatcg
accatgcaatccgggtgcggaggagacggaaccttgaggatgcatcacccggaaatagtc
aaccttcccaacatcgggcgatcagagcatcttaaccattactacaaggccaatcatttc
aacaacaacgtgatgggcctgagcattgggacaggggcaggcatcagtactctaagcaac
aagaacaacccgtccccactgaaccagcaaggccaggatatccccatctcctgtacacag
gttccaatctcctcagccactttccagaccatgtccggaaatggcgccaacaccaaccct
ctttccgtttccccacctctgccgatgtccctccccatgtcccccatgggattacacgga
tcgatcaagggtttcatgggccagaaccagaatccacaaatggagcctcttttgttcaag
ggaaactcaaaggaaaacgttcaagagactcaaatctga
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