Oncorhynchus kisutch (coho salmon): 109865507
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Entry
109865507 CDS
T09179
Name
(RefSeq) liprin-alpha-3 isoform X1
KO
K26226
liprin-alpha
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109865507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109865507
Membrane trafficking [BR:
oki04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109865507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
109865507
NCBI-ProteinID:
XP_020309339
Ensembl:
ENSOKIG00005006039
LinkDB
All DBs
Position
LG20:23796779..23835908
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AA seq
1238 aa
AA seq
DB search
MMMCEVMPTISEDGRGGGPSSPGVGAGIGGPGGAMGGGGYGGRGESRGGGDEGGSTGNLE
SLMVNMLTERERLLESLRETQDSLGTAQLRLRELGHEKDSLSRQLSIALPQEFAVLTKEL
NVCREQLLEREEEIAELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSE
VEVLKALKSLFEHHKALDEKVRERLRVALERVTLLEDQLQASAQEVISLRDQIKRRQQGL
DGGKDRLPNGPSSGLDDGEIDRQRETEIERQRAELSQLKERLALMCRQVGEIEEQLAAAR
REVTKSEEANQKLQRDVKEALCQREDMEERITTLERRYLSAQREATSLHDVKDKLENELA
SKESLHRQSEEKNRQLQERLDDAKQKLQQTLQRAETLPEIEAQLAQRVAALNKAEERHGN
FEERLRQMEAQLEEKNQALQRARQREKMNDEHNKRLSDTVDKLLSESNERLQLHLKERMA
ALEEKNSLSEELANMKKIQDDLLANKDQLIAELERIQLELDQLRGRPGSSYSRLATMELQ
GTSNVSSLPSTLFRRSLPGSASELRYPQGGGSLPAGYGSSSSGVVVRRAHRGRWAPPRDD
SNKYGEWDSGNMLGPGFEGGVEGGCSDDEDDRETLFGSELLSPSGQTDVQTLAIMLQEQL
EAINKEIKLIQEEKESTELRAEEIESRVSSVALDSSPLPPSSLGGGRDSVGRGYMTPSLT
SSTLASPSPPSSGHSTPRLPHSPARESDRQNSKEGDDCRALALIDSTPPPVPRALRLDRM
THTHPGAGLDDHREFRSSQDSLHKASKKKSIKSSIGRLFGKKEKGRIGGPGSQSASLAST
PSDDLGSADPLGLAKMGTGTVEKDRRSKKKHDLLEEACRQGLPFASWDGPTVVTWLELWV
GMPAWYVAACRANVKSGAIMANLSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSPSAPA
STRSSTSDIWMTHAEMESLTAAIKPEVKEFSWDQILAYGDMNHEWVGNEWLPSLGLPQYR
SYFMESLVDARMLDHLTKKELRGQLKMVDSFHRVSLHYGIMCLKRLNYDRKELERRRDES
QHQNQDVMVWSNERVMCWVQAIGLKEFADNLTESGVHGALLALDDTFDYTDLALLLQIPN
QNTQARQMLEKEYNALISMGTERRPDEDGTKTFTRSPSWRKMFREKDLRGVTSDSSETLP
ANFRASAISTPSVTLRKVQSEVNSGPRGESGSVRTYSC
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtgtgaggtgatgcccaccatttcggaggacgggcgaggaggaggcccctcc
tctcctggggttggggctgggattggaggccctggtggggccatggggggagggggctac
ggtggccgaggggaatccaggggcgggggtgacgagggaggcagcacagggaacctggaa
tccctgatggtcaacatgctgaccgagagggagaggctgttggagagcctgagggagacc
caagacagccttgggacggcccagctacgcctcagagagctgggccacgagaaggactcc
ctctcgagacagctgtccatcgccctgccacaggagtttgctgtgctgactaaggagctg
aatgtttgccgggagcagctactggagagggaagaggagattgctgagctcaaggcggag
agaaacaacacacgtttgctactagagcacctggagtgtcttgtgtctcgtcacgagcgc
agtctgaggatgacggtggtgaagaggcaggcccagtccccggcgggggtctccagtgaa
gtggaggtcctcaaggccctcaagtccctgtttgagcaccacaaggctttggatgagaag
gttcgagagcgactccgtgtggcccttgagagagtgactcttttggaggatcaactacaa
gcgtccgctcaagaggtgatctctttaagagaccaaattaaaagacgacaacaagggttg
gacggcgggaaagaccgcctacccaatggaccctcctctggattggacgacggtgagatc
gacagacagagagaaacggagatagagcggcagagagccgagctctcccagctgaaagaa
agattggcccttatgtgtcgacaggttggggaaatagaggaacagcttgcagccgccagg
agggaagtgacgaagtcggaggaggccaatcagaagctccagagggatgtgaaggaggct
ctgtgccaaagggaggatatggaggagaggatcactacattagagcgcaggtacctcagt
gctcagagggaagcaacctctctacatgacgtcaaagacaagctggagaatgagctggcc
agcaaggagtcactgcacagacagagtgaggagaagaacaggcagctccaggagcgtctg
gatgacgccaagcagaagctccagcagaccctgcagagggccgagacactgcccgagatc
gaggcccagctcgcccagagagtggctgccctcaacaaggcagaggagcgccatgggaat
tttgaggagcgactacgacagatggaggcacaacttgaagagaaaaatcaggcattgcag
agggcaaggcagagagagaaaatgaacgacgaacacaacaaacgcctctcggacacggtg
gacaagctactgtccgagtccaacgagagactgcagcttcacctcaaagagagaatggct
gccctcgaggagaagaattccctgtcagaggagcttgcaaacatgaagaaaatccaagat
gatctgctagcgaacaaggaccagctcatagctgagctggagaggattcagctggagctg
gatcaactgaggggcaggcctggctcttcctattccaggttagccacaatggagcttcag
gggacgagcaacgtgagctcacttccctccaccctttttcgaagatctcttccagggagt
gcctcagagctccgttacccccagggtggtggctccctcccagccggctacggcagctcc
tccagtggcgtggtggtccggagggcacaccgcggccgatgggctccccccagggatgac
agcaacaagtatggagagtgggacagtggcaacatgctgggtcccgggttcgagggggga
gtcgaggggggctgctcagatgacgaggacgacagggagaccctgtttggctcggagctg
ctctcgcccagcggacagacggacgtgcagacccttgccatcatgctgcaggagcaactg
gaggccatcaacaaggagatcaagctgatccaggaggagaaggagagcactgagctgagg
gcggaggagatcgagagccgggtgagcagcgtggccctggactcctctcctctccccccc
tcctcactgggtgggggcagggacagcgtggggaggggctacatgaccccctccctcacc
tcctccaccctggcctccccttcaccccccagctctggacattccaccccccgactgcca
cattcccctgccagagaatcagacagacagaacagcaaagagggcgacgactgccgggcg
ctagccttgattgactccacccctcctccggttcctcgtgctctgcgattggatagaatg
actcacacacacccaggggctgggctggatgatcaccgcgaattccgcagtagtcaggac
tctctccacaaagccagcaagaagaagagcatcaagtcctccattggacgcctgtttggg
aagaaggagaaggggaggatcggaggacctgggagtcagtctgcctctctggcctccaca
ccttccgatgacctgggctcagctgaccccctgggcctggccaagatgggaactggcacc
gtggagaaagatcgccgcagcaagaagaagcacgacctgctagaagaagcttgtcgccag
ggtcttcccttcgcttcatgggatggccccacggtggttacatggcttgagttgtgggtg
ggcatgcccgcctggtatgtggcagcatgtcgtgccaatgtgaagagcggtgctatcatg
gccaacctgtcggacacagagatccagcgggagattggcatcagtaaccccctgcaccgc
ctgaaactgcgcctggccatccaggagatggtgtccctcaccagcccctcggcaccggcc
agcacacgctcctcgacgagtgatatatggatgactcatgccgaaatggagtcactgacc
gctgccataaaaccagaagtgaaggagttcagctgggaccagatccttgcctatggggac
atgaaccatgagtgggtagggaatgagtggcttcccagcctgggtctgccccagtaccgc
tcctacttcatggagtccctggtggacgctcgcatgctggaccacctcaccaagaaggag
ctgaggggacagctcaaaatggtggacagcttccacagggtaagtctgcattatggcatc
atgtgcttgaagcgtttgaactacgacaggaaggagcttgaaaggaggagggatgagagc
caacatcagaaccaagatgtgatggtatggtccaatgagcgagtgatgtgttgggtccag
gccattgggctaaaggagtttgcagataacctcacagagagtggggtacatggggccctc
ctagccctggacgacacgtttgactacactgaccttgccctgctcctccagatacccaat
cagaacacacaggcgaggcagatgctggagaaggagtacaatgccctcatctccatggga
actgagagaagaccagatgaggacggcactaagacgttcacacgctcgccctcgtggagg
aagatgttcagagagaaggacctccggggcgtgacctctgactcctcagaaacattaccc
gccaacttccgtgcctccgccatctccacaccctccgtcaccctgaggaaagtccagagt
gaagtgaactctgggcccaggggtgagtcggggtcagtgagaacatattcctgctag
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