Oncorhynchus kisutch (coho salmon): 109865582
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Entry
109865582 CDS
T09179
Name
(RefSeq) speckle-type POZ protein
KO
K10523
speckle-type POZ protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
109865582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109865582
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
109865582
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BACK
Motif
Other DBs
NCBI-GeneID:
109865582
NCBI-ProteinID:
XP_020309461
Ensembl:
ENSOKIG00005028389
LinkDB
All DBs
Position
LG20:30380430..30405743
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AA seq
374 aa
AA seq
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MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSG
ANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKAEVRAKFKFSILNAKGEETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK
VPDCRLADELGGLWENSRFTDCSLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNR
VEINDVEPEVFKEMMCFIYTDKAPNLDKMADDLLAAADKYALERLKVMCEDALCTSLSVE
NAAEILILADLHSADQLKTQAVDFINYHAAEVMETAGWKSMVASHPHLVAEAYRSLASAQ
CPFLGPPRKRLKQS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagagtcccgagtccccctccccccgcggaaatgtccagcgggcctgtggcggag
agctggtgctacactcagatcaaagtggtaaaattctcctacatgtggaccatcaacaac
ttcagcttctgtcgcgaggagatgggcgaggtcattaagagctccaccttctcctcagga
gccaatgacaagctcaaatggtgtctgcgggtgaaccctaaagggctagatgaggagagc
aaagactacctgtccctctacttgctcctggttagctgtcccaaggctgaggtgcgtgcc
aagttcaagttctccatcctcaacgccaagggagaggagaccaaagccatggaaagccag
agagcatatcggtttgtccaggggaaggactggggctttaagaagttcatccgccgagac
ttcctgttggacgaggccaacggtcttctgcctgacgacaagctcaccttgttttgtgag
gtgagtgtggtgcaggactctgtgaacatctcgggtcagaacaccatgaacatggtgaag
gtgcctgactgcagactggctgatgagctgggcgggctgtgggagaactcacgcttcacc
gactgctccctgtgtgtggccgggcaggagttccaggcccacaaagccatattagcagca
cgctctcctgtcttcagtgccatgtttgagcatgagatggaagagagcaaaaagaaccga
gtggagatcaatgacgtggagccagaggtcttcaaggagatgatgtgtttcatctacaca
gacaaggcccccaacttggacaagatggctgacgaccttctagcagccgctgacaagtat
gctcttgagaggctgaaggtgatgtgtgaggatgcgctgtgcaccagtctgtctgtggag
aacgctgcagagatcctcatcctggcagacctgcacagcgccgaccagctcaaaacacag
gctgtggacttcatcaactaccatgctgccgaagttatggagacggcgggctggaagtcc
atggtggcatcccatcctcacctggtagccgaagcctaccgctcgctggcctcggcccag
tgccccttcctgggaccgccccggaaacgcctcaaacagtcttaa
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