KEGG   Oncorhynchus kisutch (coho salmon): 109865595
Entry
109865595         CDS       T09179                                 
Name
(RefSeq) neurexin-1a-like isoform X1
  KO
K07377  neurexin
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:oki00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    109865595
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oki04131]
    109865595
Membrane trafficking [BR:oki04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Others
    109865595
SSDB
Motif
Pfam: Laminin_G_2 Laminin_G_1 Laminin_G_3 EGF
Other DBs
NCBI-GeneID: 109865595
NCBI-ProteinID: XP_031655439
Ensembl: ENSOKIG00005028865
LinkDB
Position
LG20:complement(13406118..13484515)
AA seq 1376 aa
MCVRVCVMAVCVGAAAPLLCVWLCLCSLGGSRGEVLEFGGVSGQWGRFPVWNACCESILS
FSVRTHSADGLLLYLDDEGFCDFLELLLLHGKLRLRFSIFCAEPAEVSSGVAVSDGHWHA
VRVKRDWRNTSLEVDGKMEGWAEVKSKRKDMTVFSHTFMGGVSPELHASPLRLTSPGVRD
HASFAGWLAGVTVNGSVAILEGSEGVTVGDGCGPAHECQNGGVCSIVEMRAVCDCTDTGY
KGNDCSEEHYNPGLAHLMIGDQGKLRAREDDVATFKGSEYFCYDLSPSPIQSSSDEITLS
FKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNSWHDVK
VTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVS
NNFMGCLKEVVYKNNDVRLELSRLAKQGDAKMKVSGIVAFKCESVATLDPVTFDTPESFV
ALSKWSAKKAGSISFDFRTTEPNGLMLFSHGKPRQQQRKDPRTPPILKVDFFAIEMLDGH
LYLLLDMGSGTTKTKAIDRKVNDGEWYHVDFQRDGRSGTISVNSQRTAYTAPGDSEILDL
DDILYLGGLPEDRQGLIFPTEVWTALLNYGYVGCVRDLFVDGQSKDIRRLAEAQRAVGVK
PSCSREPPKQCLSNPCQHSATCREGWNRYVCDCSGTGYLGRACERDATILSYDGSKFMKV
QLPVSMHTEAEDVSLRFRSQRAYGVLMATTSRNSADTLRLELDGGRVRLTVNLDCIRINC
TASKGPETIFAGLGLNDNEWHTVRVVRRGKSLKLTVDDLQSVEGQMAGDHTQLEFHNVET
GIVTEKRFMPAVPSNFIGHLQGLTLNGMPYVDLCKNGDIDYCELNAVIGYKSIVADPVTF
RSRSSYVTLPTLQAYYSMHLFLQFKTTSPDGLVLYNRGDGNDFIVVELVKGYLHYVSDLG
NGAHLIKGNSNSPLNDNHWHNVLISRDTNNLHTVKIDTKVTTQTTMGAKNLDLKGDLYVG
GVAKEMYRDLPKLVHSREGFQGCLATVDLNGRLPDLLADALATTGQVERGCEGTHTHTGP
STTCQEDSCASQGVCLQQWEGFSCDCSMTSFGGPLCNDAGTTYIFGRDGGVIVYTWPPNE
RPSTRADRLALGFSTQQKHATLLRVDSASGLGDYLQLQIDKGNIRVVFNVGTDDINIEET
AKSVNDGKYHIVRFTRSGGNATLQLDDLPIIERYPSGNIDNERLAIARQRIPYRLGRIVD
DWLLDKGRQLTIFNSQTTVTVGRGKEAGQFQGQMAGLYYNGLKILNMAAEGHAHIRLEGS
TRLVGDMPSSSITPQSSAAAGGNRLDPASNAGDITTTTATNKKQGGGTTQQVGNEL
NT seq 4131 nt   +upstreamnt  +downstreamnt
atgtgtgtgcgcgtgtgtgtgatggcggtgtgtgtgggggccgcggcccccctgctatgt
gtctggctgtgcctctgtagccttgggggatccagaggggaggtgctagagtttgggggg
gtttcgggacagtggggccggttcccggtgtggaacgcgtgctgcgagagcattctgtcg
ttcagcgttagaactcacagcgcggacgggctgctgctttaccttgacgacgaaggattc
tgcgacttcttggaactcttgttgctacacggaaaactccgcctacgattctccatcttc
tgtgccgagccagccgaggtgagttccggggttgccgtgagcgacggccactggcatgcc
gtgcgtgtgaaacgggactggaggaacacaagccttgaggtggatggaaagatggaggga
tgggcggaggtgaagagcaaacggaaagacatgaccgtttttagccacacgtttatgggc
ggggtttccccagagctccatgcctctccgctccgcctcacttcccctggtgtaagagac
cacgcctcttttgctggctggctcgctggggtcaccgtcaacggatcggtggccattctg
gaaggatcggagggtgttaccgtgggagacgggtgtgggccggcccatgagtgtcagaac
ggaggggtgtgttctattgtcgagatgagggccgtctgcgactgtaccgacaccggctac
aaaggcaacgactgcagcgaagaacactacaacccaggtctggctcacctgatgatcggc
gaccaaggaaagctcagagcccgtgaggacgatgtagcaacctttaaggggtcagagtat
ttctgctatgacctgtctcccagccccatccagtcctctagtgatgagatcaccctgagc
tttaagaccctgcagaggaacggtctaatgctccacacgggcaaatcagccgactacgtc
aacctggccttaaagaacggagccgtgtcactggtcatcaacctggggtccggggccttc
gaggccctggtagagccggttaatgggaagtttaacgataactcctggcacgatgtcaaa
gtcacacgcaacctgagacagcactcaggcattggacacgctatggtgaccatctccgtg
gacggcatcttgaccactacgggctacacccaggaagactacaccatgttgggctcagac
gatttcttctacgtgggtggaagtcccagtactgctgacctccctggatctcctgttagc
aacaactttatgggctgccttaaagaggtggtgtataagaacaatgatgtacggttggag
ctgtctcggctggctaagcagggagatgctaaaatgaaggtgagcggtatagtggcgttt
aagtgcgagagcgtggcgaccctcgatcccgtgacctttgacaccccagagtcgtttgtg
gcattgagcaagtggagcgccaagaaggcggggtcaatctcctttgacttcagaacgaca
gaacccaacggactgatgctcttcagccacgggaaaccacggcaacagcaacgcaaggac
ccccgcacaccccccatcctaaaggtggatttctttgccatcgagatgctggatggtcac
ctgtatcttctgttggacatgggctcaggaaccaccaagaccaaggccatcgacaggaaa
gtcaacgatggcgagtggtaccacgtcgacttccagagggacgggcgctcaggtactatc
tcagtgaactcacagcgtacagcgtacaccgctccaggggacagtgagattctagacctg
gatgatatcctgtacctgggaggattaccggaggaccgccaaggactcatctttcctact
gaggtgtggacagcgttgttgaactatggatatgtgggctgtgtgagagacctgtttgtg
gacggtcagagtaaagacatccgtcggctggctgaggctcagagggctgtaggggtgaaa
ccttcctgctccagagagccccctaaacagtgtctgtccaacccctgccaacacagcgcc
acctgcagggagggctggaacagatatgtgtgtgactgctctgggaccggatacctggga
cgggcctgtgagagagatgcgaccatcctatcctatgatggtagtaagtttatgaaggtc
cagttgcccgtatcgatgcacaccgaagcagaggatgtgtcgctacgttttcgctcccag
cgggcctacggtgttctcatggcaacaacatcacggaactcagccgacacgctccgactg
gagctggacggggggcgtgtccgactcactgtcaacctagactgtatcaggattaactgt
accgccagtaagggtccagagaccatctttgcagggctggggctgaatgataatgagtgg
cacacggtcagagtggtgcgacgcgggaagagcctcaaactcaccgtcgacgacctgcaa
tctgtagaaggtcagatggcaggtgaccacacccagctggagttccacaacgtggagaca
ggcattgtgacggagaagcgcttcatgcccgctgtgccctccaacttcatagggcacctg
cagggcctcactctcaatgggatgccctatgtagacctctgtaagaacggcgacatcgac
tattgcgagctgaacgctgtgattggttataagagcatcgtggcagacccggtgacgttc
aggtcacggtcgagctacgtgaccctgccaacgctccaggcctactactccatgcacctg
ttcctccagttcaaaaccacctccccggacggactcgtactctacaacagaggagacgga
aacgacttcatagtggtggagctggtcaaaggctacctccactatgtgtccgacctgggg
aacggggctcacctgatcaaagggaactccaactctcctctgaatgacaaccactggcac
aacgtcctcatatccagagacaccaacaacctgcacactgttaagatagacaccaaggtc
actacacagaccactatgggggccaagaacctggatctcaaaggtgacctgtacgtaggg
ggcgtggctaaagagatgtaccgtgaccttcccaagctcgtccattcccgcgaaggcttc
cagggttgcctagcaaccgtcgacctcaacggccgattacccgacctgctggccgacgcc
cttgctacgaccggacaggtggagaggggctgtgaaggtacacacacacacacaggtccc
agtactacctgtcaggaagactcctgcgccagtcagggcgtgtgtttacagcagtgggag
ggatttagctgtgattgcagtatgacatcattcgggggaccgctctgcaatgacgcgggg
accacttatatctttggtcgtgacgggggtgtgatcgtgtacacctggcctcctaacgag
cgccccagcacacgggctgaccggctggcgctgggcttcagcacacagcagaaacacgct
actctgctacgggttgacagcgcctcgggactgggagactacctacagctacagatagat
aaaggaaatattcgggtagtgtttaacgtggggacagatgacatcaacattgaagagact
gctaaatccgttaatgatgggaagtaccacatagttcggtttacccgcagcggaggcaac
gcaaccctgcagctggacgacctgccaatcatagagcgctacccctcaggcaacattgat
aacgagcgcctggccatcgctagacagagaatcccctatcggctcggtcgaatagttgac
gattggctactcgacaaaggccgccagctgaccatcttcaacagccagacgacggtgacg
gtaggaagaggaaaggaagcaggtcagttccagggtcagatggccggtctctactacaac
ggactgaagatactcaacatggccgccgagggacacgcccacatccgcctggagggcagc
acacgattggttggggacatgccctcctcctccatcactccccaatccagcgctgctgcc
gggggcaaccgattagatcccgcctccaatgccggcgacatcaccacgacaaccgccaca
aataagaagcaaggaggaggaactacgcagcaggtaggaaacgaactatga

DBGET integrated database retrieval system