Oncorhynchus kisutch (coho salmon): 109865595
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Entry
109865595 CDS
T09179
Name
(RefSeq) neurexin-1a-like isoform X1
KO
K07377
neurexin
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109865595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109865595
Membrane trafficking [BR:
oki04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
109865595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Motif
Other DBs
NCBI-GeneID:
109865595
NCBI-ProteinID:
XP_031655439
Ensembl:
ENSOKIG00005028865
LinkDB
All DBs
Position
LG20:complement(13406118..13484515)
Genome browser
AA seq
1376 aa
AA seq
DB search
MCVRVCVMAVCVGAAAPLLCVWLCLCSLGGSRGEVLEFGGVSGQWGRFPVWNACCESILS
FSVRTHSADGLLLYLDDEGFCDFLELLLLHGKLRLRFSIFCAEPAEVSSGVAVSDGHWHA
VRVKRDWRNTSLEVDGKMEGWAEVKSKRKDMTVFSHTFMGGVSPELHASPLRLTSPGVRD
HASFAGWLAGVTVNGSVAILEGSEGVTVGDGCGPAHECQNGGVCSIVEMRAVCDCTDTGY
KGNDCSEEHYNPGLAHLMIGDQGKLRAREDDVATFKGSEYFCYDLSPSPIQSSSDEITLS
FKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNSWHDVK
VTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVS
NNFMGCLKEVVYKNNDVRLELSRLAKQGDAKMKVSGIVAFKCESVATLDPVTFDTPESFV
ALSKWSAKKAGSISFDFRTTEPNGLMLFSHGKPRQQQRKDPRTPPILKVDFFAIEMLDGH
LYLLLDMGSGTTKTKAIDRKVNDGEWYHVDFQRDGRSGTISVNSQRTAYTAPGDSEILDL
DDILYLGGLPEDRQGLIFPTEVWTALLNYGYVGCVRDLFVDGQSKDIRRLAEAQRAVGVK
PSCSREPPKQCLSNPCQHSATCREGWNRYVCDCSGTGYLGRACERDATILSYDGSKFMKV
QLPVSMHTEAEDVSLRFRSQRAYGVLMATTSRNSADTLRLELDGGRVRLTVNLDCIRINC
TASKGPETIFAGLGLNDNEWHTVRVVRRGKSLKLTVDDLQSVEGQMAGDHTQLEFHNVET
GIVTEKRFMPAVPSNFIGHLQGLTLNGMPYVDLCKNGDIDYCELNAVIGYKSIVADPVTF
RSRSSYVTLPTLQAYYSMHLFLQFKTTSPDGLVLYNRGDGNDFIVVELVKGYLHYVSDLG
NGAHLIKGNSNSPLNDNHWHNVLISRDTNNLHTVKIDTKVTTQTTMGAKNLDLKGDLYVG
GVAKEMYRDLPKLVHSREGFQGCLATVDLNGRLPDLLADALATTGQVERGCEGTHTHTGP
STTCQEDSCASQGVCLQQWEGFSCDCSMTSFGGPLCNDAGTTYIFGRDGGVIVYTWPPNE
RPSTRADRLALGFSTQQKHATLLRVDSASGLGDYLQLQIDKGNIRVVFNVGTDDINIEET
AKSVNDGKYHIVRFTRSGGNATLQLDDLPIIERYPSGNIDNERLAIARQRIPYRLGRIVD
DWLLDKGRQLTIFNSQTTVTVGRGKEAGQFQGQMAGLYYNGLKILNMAAEGHAHIRLEGS
TRLVGDMPSSSITPQSSAAAGGNRLDPASNAGDITTTTATNKKQGGGTTQQVGNEL
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgcgcgtgtgtgtgatggcggtgtgtgtgggggccgcggcccccctgctatgt
gtctggctgtgcctctgtagccttgggggatccagaggggaggtgctagagtttgggggg
gtttcgggacagtggggccggttcccggtgtggaacgcgtgctgcgagagcattctgtcg
ttcagcgttagaactcacagcgcggacgggctgctgctttaccttgacgacgaaggattc
tgcgacttcttggaactcttgttgctacacggaaaactccgcctacgattctccatcttc
tgtgccgagccagccgaggtgagttccggggttgccgtgagcgacggccactggcatgcc
gtgcgtgtgaaacgggactggaggaacacaagccttgaggtggatggaaagatggaggga
tgggcggaggtgaagagcaaacggaaagacatgaccgtttttagccacacgtttatgggc
ggggtttccccagagctccatgcctctccgctccgcctcacttcccctggtgtaagagac
cacgcctcttttgctggctggctcgctggggtcaccgtcaacggatcggtggccattctg
gaaggatcggagggtgttaccgtgggagacgggtgtgggccggcccatgagtgtcagaac
ggaggggtgtgttctattgtcgagatgagggccgtctgcgactgtaccgacaccggctac
aaaggcaacgactgcagcgaagaacactacaacccaggtctggctcacctgatgatcggc
gaccaaggaaagctcagagcccgtgaggacgatgtagcaacctttaaggggtcagagtat
ttctgctatgacctgtctcccagccccatccagtcctctagtgatgagatcaccctgagc
tttaagaccctgcagaggaacggtctaatgctccacacgggcaaatcagccgactacgtc
aacctggccttaaagaacggagccgtgtcactggtcatcaacctggggtccggggccttc
gaggccctggtagagccggttaatgggaagtttaacgataactcctggcacgatgtcaaa
gtcacacgcaacctgagacagcactcaggcattggacacgctatggtgaccatctccgtg
gacggcatcttgaccactacgggctacacccaggaagactacaccatgttgggctcagac
gatttcttctacgtgggtggaagtcccagtactgctgacctccctggatctcctgttagc
aacaactttatgggctgccttaaagaggtggtgtataagaacaatgatgtacggttggag
ctgtctcggctggctaagcagggagatgctaaaatgaaggtgagcggtatagtggcgttt
aagtgcgagagcgtggcgaccctcgatcccgtgacctttgacaccccagagtcgtttgtg
gcattgagcaagtggagcgccaagaaggcggggtcaatctcctttgacttcagaacgaca
gaacccaacggactgatgctcttcagccacgggaaaccacggcaacagcaacgcaaggac
ccccgcacaccccccatcctaaaggtggatttctttgccatcgagatgctggatggtcac
ctgtatcttctgttggacatgggctcaggaaccaccaagaccaaggccatcgacaggaaa
gtcaacgatggcgagtggtaccacgtcgacttccagagggacgggcgctcaggtactatc
tcagtgaactcacagcgtacagcgtacaccgctccaggggacagtgagattctagacctg
gatgatatcctgtacctgggaggattaccggaggaccgccaaggactcatctttcctact
gaggtgtggacagcgttgttgaactatggatatgtgggctgtgtgagagacctgtttgtg
gacggtcagagtaaagacatccgtcggctggctgaggctcagagggctgtaggggtgaaa
ccttcctgctccagagagccccctaaacagtgtctgtccaacccctgccaacacagcgcc
acctgcagggagggctggaacagatatgtgtgtgactgctctgggaccggatacctggga
cgggcctgtgagagagatgcgaccatcctatcctatgatggtagtaagtttatgaaggtc
cagttgcccgtatcgatgcacaccgaagcagaggatgtgtcgctacgttttcgctcccag
cgggcctacggtgttctcatggcaacaacatcacggaactcagccgacacgctccgactg
gagctggacggggggcgtgtccgactcactgtcaacctagactgtatcaggattaactgt
accgccagtaagggtccagagaccatctttgcagggctggggctgaatgataatgagtgg
cacacggtcagagtggtgcgacgcgggaagagcctcaaactcaccgtcgacgacctgcaa
tctgtagaaggtcagatggcaggtgaccacacccagctggagttccacaacgtggagaca
ggcattgtgacggagaagcgcttcatgcccgctgtgccctccaacttcatagggcacctg
cagggcctcactctcaatgggatgccctatgtagacctctgtaagaacggcgacatcgac
tattgcgagctgaacgctgtgattggttataagagcatcgtggcagacccggtgacgttc
aggtcacggtcgagctacgtgaccctgccaacgctccaggcctactactccatgcacctg
ttcctccagttcaaaaccacctccccggacggactcgtactctacaacagaggagacgga
aacgacttcatagtggtggagctggtcaaaggctacctccactatgtgtccgacctgggg
aacggggctcacctgatcaaagggaactccaactctcctctgaatgacaaccactggcac
aacgtcctcatatccagagacaccaacaacctgcacactgttaagatagacaccaaggtc
actacacagaccactatgggggccaagaacctggatctcaaaggtgacctgtacgtaggg
ggcgtggctaaagagatgtaccgtgaccttcccaagctcgtccattcccgcgaaggcttc
cagggttgcctagcaaccgtcgacctcaacggccgattacccgacctgctggccgacgcc
cttgctacgaccggacaggtggagaggggctgtgaaggtacacacacacacacaggtccc
agtactacctgtcaggaagactcctgcgccagtcagggcgtgtgtttacagcagtgggag
ggatttagctgtgattgcagtatgacatcattcgggggaccgctctgcaatgacgcgggg
accacttatatctttggtcgtgacgggggtgtgatcgtgtacacctggcctcctaacgag
cgccccagcacacgggctgaccggctggcgctgggcttcagcacacagcagaaacacgct
actctgctacgggttgacagcgcctcgggactgggagactacctacagctacagatagat
aaaggaaatattcgggtagtgtttaacgtggggacagatgacatcaacattgaagagact
gctaaatccgttaatgatgggaagtaccacatagttcggtttacccgcagcggaggcaac
gcaaccctgcagctggacgacctgccaatcatagagcgctacccctcaggcaacattgat
aacgagcgcctggccatcgctagacagagaatcccctatcggctcggtcgaatagttgac
gattggctactcgacaaaggccgccagctgaccatcttcaacagccagacgacggtgacg
gtaggaagaggaaaggaagcaggtcagttccagggtcagatggccggtctctactacaac
ggactgaagatactcaacatggccgccgagggacacgcccacatccgcctggagggcagc
acacgattggttggggacatgccctcctcctccatcactccccaatccagcgctgctgcc
gggggcaaccgattagatcccgcctccaatgccggcgacatcaccacgacaaccgccaca
aataagaagcaaggaggaggaactacgcagcaggtaggaaacgaactatga
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