KEGG   Oncorhynchus kisutch (coho salmon): 109865597
Entry
109865597         CDS       T09179                                 
Name
(RefSeq) elongin-B
  KO
K03873  elongin-B
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    109865597
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oki04121]
    109865597
   03400 DNA repair and recombination proteins [BR:oki03400]
    109865597
Ubiquitin system [BR:oki04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul2 complex
    Adoptor protein
     109865597
   Cul5 complex
     109865597
DNA repair and recombination proteins [BR:oki03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     109865597
SSDB
Motif
Pfam: ubiquitin Rad60-SLD
Other DBs
NCBI-GeneID: 109865597
NCBI-ProteinID: XP_020309490
Ensembl: ENSOKIG00005021226
LinkDB
Position
LG20:complement(29800736..29822168)
AA seq 119 aa
MDVFLMIRRQKTTIFTDAKESTTVYELKRIVEGILKREPEEQRLFKDDQLLEDSKTLGDC
GFTNQTARPQAPGTVGLAFRMGDEMFEQLQVGAFSSPPELPDVMKPQDSGSTANEQTVQ
NT seq 360 nt   +upstreamnt  +downstreamnt
atggatgtgttccttatgatccggcgtcagaagaccaccattttcacagacgccaaagag
tccaccaccgtctacgagctgaagcgcattgtagagggaattctcaagagagagcctgag
gaacagaggctcttcaaggatgaccagttgctagaagacagtaaaactcttggcgattgc
ggcttcaccaaccagactgcaagacctcaggccccaggcactgttggactggctttccga
atgggtgatgagatgtttgagcaactgcaggtgggggcattctccagccctccagagctc
cctgacgtcatgaaaccccaagactctggcagcactgccaacgaacagactgtgcagtga

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