Oncorhynchus kisutch (coho salmon): 109865614
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Entry
109865614 CDS
T09179
Name
(RefSeq) integrin beta-2
KO
K06464
integrin beta 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04145
Phagosome
oki04514
Cell adhesion molecule (CAM) interaction
oki04517
IgSF CAM signaling
oki04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
109865614
04517 IgSF CAM signaling
109865614
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109865614
09142 Cell motility
04810 Regulation of actin cytoskeleton
109865614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109865614
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109865614
04515 Cell adhesion molecules [BR:
oki04515
]
109865614
04090 CD molecules [BR:
oki04090
]
109865614
Membrane trafficking [BR:
oki04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
109865614
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109865614
Cell adhesion molecules [BR:
oki04515
]
Integrins
Integrin beta subunits
109865614
CD molecules [BR:
oki04090
]
Proteins
109865614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
EGF_integrin
vWA_SIBA-E
EGF_2
I-EGF_1
Motif
Other DBs
NCBI-GeneID:
109865614
NCBI-ProteinID:
XP_020309520
Ensembl:
ENSOKIG00005005385
UniProt:
A0A8C7DTX2
LinkDB
All DBs
Position
LG2:39120475..39141622
Genome browser
AA seq
777 aa
AA seq
DB search
MYKCVSLLLLLMGRGVLSQEVEVCSKTVINSCSDCIRSGAYCTWCKQLNFTKPGEQEAAR
CDTRAQLEERGCMGNDIISPMNTLTVTKNTALSTNAFVKDEPIQLRPQEVNLKLRPGLPR
TFKLDFRRVEGYPVDLYYLMDLSYSMEDDLRSIKTLGNELFKALQGITKQGRIGFGSFVD
KTVLPFTNTNPEKLKKPCEEKELFCQPAFGYRHVLSMTENKADFNREVDKQRISGNLDSP
EGTLDAIMQAAVCGDRIGWRNSSTRLIVLTTDDGFHMAGDGKLAGILEPNDERCYMDKQL
YTKSNDMDYPSVGQVASQLEKNNIQPIFAVTKNMENVYRELSRMIPKSEVGVLSEDSKNV
VELIQAAYNRLSSKVTVTHDALPDNVRVTYTPLCPGGGPAGDKGVCDNVIVGEMVSFNVT
VTADECIDRERSFLIGPLGIKDKLKVSLSTRCECECDDPKEENHKDCDRKGKVNCGMCSC
NAGFVGQKCECAIGEKDESSLRAACRKDNGTECEGRGDCVCGICQCYVQQGGSTYYGTHC
ECENESCEKFQNKLCGGNGKCRCKICECNPEYEGTACQCKKSDEQCRTPSGSVCSGRGTC
QCNQCKCIEGYQRPYCLTCPACQTPCITKGKCIECLGFQTGPFSKNCSQTCKSINEFEMV
ETLPPGKPCDVRDVENCRVFFIIKQLDGEDNYFAQILKTRECPELPNIYAIIGGSIAGVA
LIGLLILLIIKAILYMRDVKEFRRFENEQKKGKWTPGDNPLFMNATTTVANPTFTGE
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgtataagtgtgtgtctctcctactcctgctgatgggcagaggagttctctcccaggaa
gtggaagtatgttccaaaacggtgatcaactcctgcagcgactgcatcagatcaggagca
tactgcacgtggtgtaaacaactgaacttcaccaagccaggtgagcaagaagcagctcgc
tgtgacacccgggctcagctagaagagaggggctgcatgggaaacgacatcatatccccc
atgaatacccttactgtgactaagaacaccgccctgtccaccaatgcatttgtcaaggac
gaacccatccagctgcgtcctcaggaggtcaatctgaagctcagaccagggctgcctcgg
acgttcaagctggattttcggagagtggagggctatcctgttgatctctactacctgatg
gatctctcctactccatggaggacgatctgaggagcatcaagactctgggaaacgagctc
tttaaagctctgcaaggaatcacaaaacaagggcgaataggcttcggctctttcgtagac
aagactgtcctgcctttcactaacaccaacccagagaagctgaagaagccatgcgaagaa
aaggagctgttctgtcaacctgcctttggctacaggcatgttcttagcatgacagagaac
aaagctgactttaatagggaggtagacaagcagcgcatctctgggaacttggactcccct
gaagggacgctggatgccatcatgcaggctgcagtatgtggggacaggattggctggagg
aatagcagcactcggctaatcgtcctgaccaccgacgatggcttccacatggcaggggat
ggcaagctggctggcatactggagcccaacgacgagagatgttacatggacaagcagctg
tacactaagagcaatgacatggactacccatctgttggtcaagtggcttcacagttagag
aagaacaacattcagccaatctttgctgtgacaaagaacatggagaatgtatacagggaa
ctcagtagaatgatccccaagtctgaggtgggagtactgtcagaggactccaaaaatgtt
gttgaattgatccaagctgcctacaataggctctcctccaaagtgacagtgactcatgat
gctctccctgacaatgtgagagtcacttacactccactctgtcctggagggggacccgca
ggggacaagggggtctgtgataacgtcatagtaggagaaatggtgtctttcaacgtaaca
gtgacggcagatgaatgtatagacagggagaggtcttttctgattggcccattgggcata
aaagacaagctgaaggtgagcttgtcgactcgctgcgagtgtgaatgtgatgaccccaag
gaggagaatcacaaggactgcgacaggaagggcaaagtcaactgtggcatgtgcagttgc
aatgccggcttcgtgggtcagaagtgcgagtgcgccatcggggagaaggacgagagctct
ctgagggctgcatgccggaaggacaacggcacggagtgcgaaggacgaggggactgtgtg
tgtggcatttgccagtgctatgtccaacaaggcggcagcacctactacggcacgcactgc
gagtgtgaaaacgagagctgcgagaagtttcagaacaaactgtgtggagggaacgggaaa
tgccgttgtaaaatttgcgaatgcaaccccgagtacgaaggcaccgcctgccaatgcaag
aagtcggacgagcagtgtcgcacaccaagcgggagcgtgtgcagcggcaggggaacatgc
cagtgtaaccagtgcaagtgtatcgagggctaccagcggccctactgtctgacctgtccc
gcctgccagactccctgtataaccaaggggaagtgcatcgagtgtctgggctttcagaca
ggcccattcagcaagaactgctcccagacctgtaagagtattaatgaatttgagatggtg
gagacattgccacctggtaagccttgtgacgtgagggatgtggagaactgccgggtgttc
tttatcattaaacagttggatggagaggacaactactttgcccagatactaaagacccga
gaatgtccggagttgccaaacatctacgccatcattggaggctccattgcgggcgtggcc
ctgatcggcttactgatcctgctcatcatcaaagccatcctctacatgagagacgtgaag
gagttccgcaggtttgagaatgagcagaagaaaggaaagtggactccgggagacaatcca
ctattcatgaacgcgaccaccaccgtggctaaccctaccttcactggagaataa
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