KEGG   Oncorhynchus kisutch (coho salmon): 109865673
Entry
109865673         CDS       T09179                                 
Name
(RefSeq) transcription factor Sox-9-B
  KO
K18435  transcription factor SOX9 (SOX group E)
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:oki03000]
    109865673
Transcription factors [BR:oki03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    109865673
SSDB
Motif
Pfam: HMG_box Sox_N HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 109865673
NCBI-ProteinID: XP_020309628
Ensembl: ENSOKIG00005035365
LinkDB
Position
LG20:16776784..16780686
AA seq 490 aa
MNLLDPFLKMTDEQDKCLSDAPSPSMSEDSVGSPCPSGSGSDTENTRPSENGLLMGPDGP
LVEFKKDDDDKFPVCIRDAVSQVLKGYDWTLVPMPVRMNGSSKNKPHVKRPMNAFMVWAQ
AARRKLADQYPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAERLRVQHKKDHPDYKYQPR
RRKSMKNGQSESDDGSEQTHISPGAIFKVLQQADSPASSMGEMHSPGEHSGQSQGPPTPP
TTPPTKTDIQVGKVDLKREGRPLHEGTGRQLNIDFRDVDIGELSSDVISHIETFDVNEFD
QYLPPNGHPGAPGAATGQVSYTGTYGISSSVVSQAAGGATGHSWMTKSQQHSLTTLGSGG
EQGQNQRTPTHIKTEQLSPSHYNDQQSSSPPQHVNYGSFNLQHFSSSSYPSITRGQYDFS
DHQGGTNSYYSHTAGGQGSGLYSFSSYMSPSQRPMYTPIADTTGVPSVPQTHSPQHHWDQ
QPVYTQLSRP
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgaatctactcgaccccttcctgaaaatgacagacgaacaagacaaatgtctctcagac
gcaccgagtccgagcatgtcagaggactctgtgggatctccgtgcccgtccgggtctggc
tccgacaccgagaacaccagaccgtcagagaacggactgctgatgggtccggacggtccc
ctcgtcgagttcaagaaggacgacgatgacaaattccccgtatgcatccgcgacgcggtg
tcccaggtcctgaaaggctacgactggaccctggtgccaatgccagtccgaatgaacgga
tctagtaagaacaagccccacgtcaagagaccgatgaacgcgtttatggtttgggcgcaa
gccgcccggagaaagctggctgatcagtacccgcatctccataacgctgagctgagcaaa
actctggggaaactgtggaggctactcaatgagggtgagaagcgtccgttcgtggaggag
gcagagcgattgagggtacagcacaagaaagaccaccctgactacaagtaccagccccgg
cggaggaagtccatgaagaacggacaaagcgagtctgatgacggcagcgagcagacgcac
atatcgccaggcgcgatcttcaaggtgctccagcaagctgactctccagcctctagcatg
ggagagatgcactcccccggagaacactccggccagtcccaagggccccccacccctcct
accacccctcctaccaagacagacatccaggtgggcaaggtggacctgaagcgggagggt
cgccccttacatgaaggcacgggtcgccagctcaacatcgacttccgggacgtggacatc
ggtgagctgagtagcgacgtcatctcccacatcgagaccttcgatgtcaacgagtttgat
cagtacctgcctcccaacggtcacccaggtgctcctggcgctgccactggccaagtgtcc
tacaccggtacctacggcatcagcagctctgtggtcagccaggcagcagggggtgccaca
gggcacagctggatgaccaagagccagcagcactccctgaccacgctgggtagtggaggg
gagcagggccagaaccagaggacccccacacacatcaagacagagcagctgagccccagc
cactacaatgatcagcagagctcctcccctccgcagcacgtcaactacggctcattcaac
ctgcagcacttcagctcgtcctcctacccctccatcacccggggccagtatgacttttct
gaccaccagggcggcaccaactcctactatagccacacagccgggggccagggctcaggg
ctctactccttcagcagctacatgagccccagccagaggcccatgtacacccccatcgca
gacacaaccggggtgccctccgtgccccagacccacagtccccagcatcactgggaccag
cagccagtgtacacacagctctcccggccctga

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