Oncorhynchus kisutch (coho salmon): 109865687
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Entry
109865687 CDS
T09179
Name
(RefSeq) putative tRNA pseudouridine synthase Pus10
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oki03016
]
109865687
Enzymes [BR:
oki01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
109865687
Transfer RNA biogenesis [BR:
oki03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
109865687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_N_euk
Pus10_C
Motif
Other DBs
NCBI-GeneID:
109865687
NCBI-ProteinID:
XP_031655471
Ensembl:
ENSOKIG00005024865
LinkDB
All DBs
Position
LG20:40349405..40360089
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AA seq
458 aa
AA seq
DB search
MLPLKEKDRPIVKKLLEAGCCARCVLRFCCLGVQSAYRQSYEDTAKELCAFISDSENNKS
QDAAVLEQHTEDPPRKKIKMDAAETGVQSEGDSAVVPAVMEEGDAKPADSDVCAVCLGVL
QEFCDEAYAIKISDVVKVKNYQFDTMVLSVSLTAQLSVREHSCWLHVKKEVREKSICLDK
DDVIQVKEAFKWTMQGLMSKELGGVPVVTKISRQTEQFEVGVGFTHPETDSDCHFLAGIC
SDCFRPSKNKQNVFTRMAVVKALEKVSDEKFLKKFPCPPTRPARKCIAQEVQCLHVSVFV
AGRYNKFSRTLPQTPWVIDGERRMESSVEELIAASLFSSFRAEGFNFSSSGREEVDVRTL
GNGRPFALELLNPHRARFNKAEVRQLQETINQSSDKIRVRDLQIVSRDAMGHMKEGEEDK
TKSYTALIWTQKAINKDDITFLEETKELKLAQKTPLRV
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgttgcccctgaaggagaaagatagaccaatagtgaagaagctgctggaagctggatgc
tgtgcccgctgtgtcctgaggttctgctgcttgggggtgcagtcagcctaccgccagtct
tatgaggatacagcaaaggagctttgtgctttcatcagtgattcagagaataacaaatcc
caagatgcagccgtgctggagcagcacacagaagacccccctcgtaaaaaaattaagatg
gatgcggcggagacgggcgtccaatcagaaggcgactctgccgtggttcccgcggtgatg
gaggaaggcgacgccaagccagcggactcggacgtgtgtgcggtgtgcctgggagttcta
caggagttctgtgatgaagcctatgccataaagatatcggatgtggtgaaggtcaaaaac
taccagtttgacacgatggtactgtccgtctccctgacggcccagctgtctgtcagagag
cactcttgttggctgcatgtaaagaaggaagtgagggagaagtctatatgcctcgataag
gatgatgtcatccaggtgaaggaggccttcaagtggaccatgcagggtctgatgtccaaa
gagcttggtggcgtacctgtggtgaccaagatcagtcgtcaaactgaacagtttgaggtg
ggcgtggggttcacacatccagagacggactcagactgccacttcctggctggcatctgt
tcagactgcttcagaccaagtaagaacaaacagaatgtcttcactagaatggccgtggtc
aaagccctcgagaaggtttccgatgagaagtttctaaaaaagttcccctgtccccctaca
cggccagcgaggaaatgcattgctcaagaggtccagtgtcttcacgtttctgtatttgtg
gcggggaggtacaacaagttctcccgcaccctgccccagaccccctgggtgattgacgga
gagaggaggatggagtcgtcggtggaggagctaatcgccgcatccctcttctcctctttc
cgggctgaggggtttaatttctcctcctcagggagggaggaggtggatgtgcggacgctt
ggaaatggtcgtccgtttgcactggagctgctaaatcctcacagagccaggttcaataag
gcagaggtccgacagctgcaggagaccatcaaccagtcctcagacaaaatcagagtacga
gatctacagattgtaagcagagatgctatgggccacatgaaggagggtgaggaggacaag
accaagtcgtacaccgccctcatatggacccagaaagccatcaacaaagacgacatcacg
ttcttagaggaaaccaaggagttgaagctagctcagaagacgccactaagagtgtag
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