Oncorhynchus kisutch (coho salmon): 109865709
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Entry
109865709 CDS
T09179
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
109865709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109865709
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109865709
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109865709
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
TRIM_CC
zf-RING_UBOX
zf-RING_2
zf-C3HC4_2
zf-C3HC4_3
zf-B_box
zf-C3HC4
zf-C3HC4_4
zf-RING_5
ANCHR-like_BBOX
U-box
YwqH-like
CC_BshC
Motif
Other DBs
NCBI-GeneID:
109865709
NCBI-ProteinID:
XP_020309682
Ensembl:
ENSOKIG00005021972
UniProt:
A0A8C7H2S1
LinkDB
All DBs
Position
LG20:complement(41481862..41497119)
Genome browser
AA seq
675 aa
AA seq
DB search
MAEDMFSLMSLEDELSCSICLCAFDCPVTIPCGHNFCQECLLETWKDNYSCPQCRTHFTT
KPELKKNTVLSTVVETFKMKSNKSDLPSEVDDFIMWDAVKMEPKEVAILCDTCMEAKAFK
TCLTCMASFCLEHVRPHHENPVFGAHQLNEPLGDLRDRICTDHHKLMEFYCVQHGRCICG
VCLQQVHKGCTFSSPDEQRALQESDLRGKLSLLDGKIDKNQTVISQMSDQQSKLKDSAAS
RKRALEDEYRQIRELLDRDEREALNTVDREQESAQTKLQNLIKKFNQNIVKLSAAKDGVD
SLLSQTQTVAFLQASVDMPAAVAFDPYTPKVNLDSKALAAWHAYSAVLREHLTHVLKQPV
EARLQILKPAERFAPPLLPNIYEMGGMPPQGHPRMPRSHSPGAPLRANQRKKPPQDSNRE
RKSDKKRDHKEGKEHKADKNPQKPPNAPREFATPVPHTPRDHPRGQSAEPRPRNREDPGQ
PSVLPSITSAAKRNDLLQYGTVLTLDLKTAHKRISLTENMTVASVSDDPTPYPDGPARFS
VYSQVLTSKGFSRGRHYWEVKMSSNNFTGIGLAYNSIDRKGPASRLGRNAQSWCVEWFNV
KLSAWHASSETVLQNPNPTRVGVLLDCEEGTATFYNVQDRAYPFHTFVFQFAEAVYPAFW
LFSSGSSVSLCKLQS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggatatgttttccctcatgagtctcgaagacgaactgagctgtagcatctgc
ctctgtgctttcgactgtccggtgacaattccatgtggacacaacttttgccaagagtgt
ctcctagaaacctggaaagacaactacagctgtccacaatgccggacccacttcaccacc
aaaccagagctgaagaagaacaccgttctcagcactgttgtggaaacgttcaaaatgaag
tcgaataaaagcgacctccccagtgaggtggacgacttcatcatgtgggatgcggtcaag
atggagcccaaagaggtggctatcttgtgcgacacctgtatggaagccaaagcattcaag
acctgcctcacctgtatggcgtcattctgccttgagcacgtgaggcctcatcatgagaac
ccagtgtttggcgcgcatcagctgaacgagcctctgggtgacctgcgcgaccgtatctgc
accgaccaccacaagctgatggagttctactgtgtccaacatggccgctgtatctgtggt
gtctgtctgcagcaggtgcataaaggctgtaccttctccagccctgatgaacaacgggca
ctgcaagagtctgatttgaggggcaagttgagtctgctggatggaaagattgacaagaac
cagactgtcatctctcagatgagtgaccagcagagcaagttgaaggactctgcagccagc
aggaagagagctctggaggacgagtaccgccaaatccgggagctgctggaccgtgacgag
cgtgaggctctgaacaccgtggaccgcgagcaggagagtgctcagaccaaactccagaac
ctcataaagaagttcaaccagaacattgtgaagcttagtgcggcaaaagatggcgtcgac
agcctgctcagtcagactcagaccgtggctttcctacaggcctcagttgacatgccggca
gcggtggcctttgacccctataccccgaaggtcaacctggactctaaggccttggcagcc
tggcatgcctactctgcagtcctgagggagcatctcacacatgtactgaaacagcctgta
gaggccagactgcagatactcaaaccagctgagaggtttgctcctcctctgctgccaaac
atctatgaaatgggaggcatgccaccacaaggtcacccgagaatgcctcgatcccacagc
ccaggagcccccctcagggcaaaccagaggaagaagcctccacaagattcaaaccgagag
agaaagtcagacaagaaacgagatcacaaagaagggaaagaacataaggctgacaaaaat
ccccaaaagccacctaatgctcccagagagttcgccactcctgttccacacacaccaagg
gaccaccccagagggcaatcagcagaacccagacccaggaacagggaggacccaggacaa
ccaagtgttctcccaagtatcacgtctgcagcaaaacgaaatgaccttctgcaatatggc
acggttctcacccttgacctcaaaacagcccacaagcgcatctccctcacagagaacatg
accgtggcctctgtgtcagacgatcccaccccttaccccgatggccccgcccgtttctcc
gtctacagccaggtgctcacttccaagggcttctcccgcggccgccactactgggaggtc
aagatgagcagcaacaacttcaccggcatcggcctggcctacaacagcatcgaccggaag
ggtccggctagccggctggggcgtaacgcccagtcctggtgcgtggagtggttcaacgtc
aagctgtcggcctggcacgccagcagtgagactgtactgcagaacccgaatccgacccgc
gtcggcgtgctgctggattgcgaggagggaacggccactttctataacgtacaggaccgg
gcatacccgttccatacgtttgtgttccagttcgccgaggcagtgtacccggcgttctgg
ctcttctccagcggctcgtctgttagcctatgcaagctgcagtcttga
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integrated database retrieval system
