Oncorhynchus kisutch (coho salmon): 109865729
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Entry
109865729 CDS
T09179
Name
(RefSeq) platelet endothelial cell adhesion molecule isoform X1
KO
K06471
platelet/endothelial cell adhesion molecule
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04148
Efferocytosis
oki04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
109865729
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109865729
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oki04090
]
109865729
00536 Glycosaminoglycan binding proteins [BR:
oki00536
]
109865729
04091 Lectins [BR:
oki04091
]
109865729
CD molecules [BR:
oki04090
]
Proteins
109865729
Glycosaminoglycan binding proteins [BR:
oki00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
109865729
Lectins [BR:
oki04091
]
I-type lectins (Siglecs)
109865729
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_2
Ig_3
I-set
ig
Ig_C17orf99
V-set
Ig_C19orf38
Zwei_Ig_N
ICAM_N
GDU_TM
Motif
Other DBs
NCBI-GeneID:
109865729
NCBI-ProteinID:
XP_020309714
Ensembl:
ENSOKIG00005031395
LinkDB
All DBs
Position
LG20:42777895..42794230
Genome browser
AA seq
777 aa
AA seq
DB search
MWEPQQPSVRMVTRLLLLTSALLSTCQAAESPALFTSVTLTLEPSNAVSQGTNVTVRCQA
LVSSSGFLNRKYTIYKDNTVVYTESITTAEDLIYSLRMARVANTGKYKCKVNIPGKELSS
SSEKLTVTGLQTPVLSVDKRVFSEGEEVTVGCKAPGESGAIVFYFYKDSKELYEERVDAN
HVETRLRFNNAGDHRLHCDYRVILLTDSVPSNASNNVVVTVKELFITPVISVRPHGSMII
EGDNLDISCSVSGNLQNSSGLKVFLSKGPTLLSSGQSKANHSMRALAEHSGEFQCSLEVG
NVVKRATENVRITELFSQPVLTMYPTEVFEREKITLTCKSTNYSSDRISASDVKYSIYKD
NYTLTPGSFNGIYVVPGVVPNSSGIYSCKADARMISKYSAKLPVQAKVLVSKPEITAIGR
VIVGKPFQVRCHSDRGSLPIEYTLWKKYSEVNSTTVQQPHHQAIFPVTVQHYSDMQDYKC
EARNNPKIDTVVSNKLNTTVIVPLSNPGLSVVPDLLEVTEGNEMYLICGVEGSPPVTFKW
YRRGNVQPLCTTTSTQSSASHHIKGVGNEHSGTYYCEAINYANMVRSQPVTVDVKMATWK
KGLIVACCLLVVALLALACVLRYNSKRGKRENAAELSVKPSSPKSDDSLTVSLTHSTMEV
YNPPEVGVDAAVSVWSERPVDPGSDGESSAASNNEPDVEYTEVVHRQPVDPARAPLRKGT
ETVYSEVQNSPTGAPGDHYDYQGSVEYADLNGDQPEVNHALLEVNHQDHHDLPVPVE
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgtgggagccccagcagccctctgtcaggatggtcacccgactactactgctaacctcc
gcactcctctccacctgtcaagcggcggaatcgccggcattgttcacaagtgtcaccctg
actctcgagcccagcaacgccgtctcccagggtaccaacgtgacggtacgctgccaggcc
ttggtcagcagctctgggttcctgaaccgtaaatacaccatctacaaggacaacaccgtg
gtgtacacggagagcatcaccaccgcagaggacctcatctactctctgcgcatggccaga
gtggccaacactgggaagtacaaatgcaaggtgaacataccgggcaaggagctaagcagc
agctctgagaaactgactgtgacaggcctgcagacgccagtcctcagcgtcgacaagcgc
gtgttcagcgagggagaggaggtgaccgttgggtgtaaggcccctggggagtccggcgct
atcgtcttctacttctacaaggactccaaggaactctacgaggagagggtcgatgccaac
catgtggagactaggctgcgattcaacaacgctggtgaccacaggctacactgtgactac
agggtcatactgctgacagactcggtcccgtccaatgccagcaacaatgtggtggtcact
gtaaaagagctgttcatcacacctgtaatctctgtccgaccacacggatcaatgatcatc
gaaggggacaatctggacatctcctgcagtgtcagtggtaacctccagaacagctctggg
ctcaaagtcttcctgtccaagggaccgactctgctgagttctggtcaaagtaaagccaac
cacagcatgagagccctggccgagcactctggggagtttcagtgctctctggaggtggga
aatgtagtcaagcgagcgacggaaaacgtgaggattacagaactgttttcccagccagtt
ctgaccatgtatccgacagaggtctttgaaagggagaaaatcacgttaacctgcaagagt
accaactactcctctgacagaatcagcgcttcggatgtgaaatactccatttacaaggac
aattacacactgacgccaggcagcttcaatgggatatacgttgtccccggggtggtaccg
aactcgagtgggatttattcatgtaaagcagatgccaggatgatctccaagtacagtgca
aagctgcctgtccaggcaaaagttcttgtcagtaaaccggagatcacggccattggcagg
gtgatcgtgggaaagcccttccaggtgcgctgtcactcagaccgaggcagcctacccatc
gagtacaccttgtggaagaagtattctgaggttaactcgaccaccgtgcagcagccgcac
catcaggccatcttccctgtcaccgtccagcactacagcgacatgcaggactataaatgc
gaggcgcggaataaccccaaaatcgacacggtggtcagcaacaaactcaacaccacagtc
atagtgcctctgtccaatccaggactcagcgtcgtcccagacctgttggaggtcacagag
ggaaatgagatgtacctgatttgtggggtggaaggttccccgcccgtcacctttaagtgg
taccgacgtgggaacgtccagccgctgtgcaccaccacctcaacccaatccagcgcgtcc
caccatatcaagggagtggggaacgagcacagtggcacctactactgcgaggctatcaac
tacgctaacatggtccggagtcagccagtcaccgtagatgtgaaaatggcaacgtggaag
aaaggtttgatcgtggcctgctgtctgctagtggtggctctcctagccctcgcctgcgtg
ctgcgctacaattccaagagaggtaaaagagagaacgcagctgaactgtcagtaaagcct
tcgagccctaaatcagatgactctctaacagtgagtcttacccacagcactatggaggtt
tataacccgcccgaagttggagtggatgctgctgtaagtgtctggagcgagaggccggta
gacccaggcagtgacggggagagcagtgcagcgtctaataatgagcctgatgtggagtac
actgaagtggtacaccgtcaaccagtggaccctgccagagctcccctgagaaaaggcaca
gaaacggtgtacagtgaagtccagaactccccaacaggtgcacctggtgaccattatgac
tatcagggttcagtggagtacgccgatctcaacggtgaccaaccggaggtcaaccatgcc
ctgctggaggtcaatcaccaggaccaccatgacctcccagtgcctgtggagtaa
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