KEGG   Oncorhynchus kisutch (coho salmon): 109865737
Entry
109865737         CDS       T09179                                 
Name
(RefSeq) RNA-binding protein with serine-rich domain 1 isoform X1
  KO
K14325  RNA-binding protein with serine-rich domain 1
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03013  Nucleocytoplasmic transport
oki03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109865737
   03015 mRNA surveillance pathway
    109865737
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oki03019]
    109865737
Messenger RNA biogenesis [BR:oki03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     109865737
SSDB
Motif
Pfam: RRM_1 RRM_ACIN1 RRM_3 RRM_7 RRM_5 RRM_occluded RRM_MUD2_C Nup35_RRM_2 KdpD PI3K_1B_p101
Other DBs
NCBI-GeneID: 109865737
NCBI-ProteinID: XP_020309738
Ensembl: ENSOKIG00005036190
LinkDB
Position
LG20:complement(17616097..17625461)
AA seq 301 aa
MSHSPVQLCNVISLRLVAATRTNMAPSPVRRKEHMDDKAKERGKEKTGATKEKPEKGREK
EKGRKRRSSTGSSRSSSSSSSGSSSGSSSGSSSSSASSRSGSSSSRSSSSTSSGSPSPSR
RRHDNHRRSRSKSKSSVKKDDKERRKRSPSSRPTKVYLGRLTRNVVKEHIQEIFSSYGKI
KMIDMPVDRLRSHLSKGYAYVEFENADEAEKALKHMDGGQIDGQEITATAVLAPRVIHPP
PRRPSPPRRMPPPPPMWRRTPPRLRRRSRSPRRRSPVRRRTRSRSPGRRRHRSRSSSNSS
R
NT seq 906 nt   +upstreamnt  +downstreamnt
atgtcacattctccggttcaactttgcaacgtcatctctctgcgacttgttgctgcaacc
agaacaaatatggcgccttctccagtgaggaggaaggagcatatggatgacaaggcaaaa
gagcgagggaaggagaaaacgggtgccaccaaggagaaacctgagaagggcagggagaag
gagaagggacgcaagcgacgtagctccactgggagcagcaggtccagctccagtagcagc
tctggctccagctccggttcttccagtggctccagttcctcctctgcctcaagccgctcc
gggtcttccagctcccgatcttctagctcaaccagctccgggtcgcccagccccagtcgc
cgccgccacgacaaccaccgccgctcacggtccaaatccaagtcatcagtgaaaaaggat
gacaaggagaggcgtaagaggagccccagctcccgaccaaccaaggtgtacctgggccgc
ctcaccagaaacgttgtcaaggaacacatccaggagatcttcagctcctatggcaaaatc
aagatgattgacatgcctgtggacaggctccgctcacacctgtcaaagggctacgcctac
gtggagtttgagaatgccgatgaggctgagaaggctctaaaacacatggatggaggtcag
attgacggacaggagatcacagccactgccgtgctggctcctagggtaatacacccgccc
cctcgcaggccctcccctcctcgcaggatgcccccaccacccccgatgtggcgacgcacc
cctccacgcctgaggagaaggtctcggtcaccacggagacgctctccggttcgccgcagg
actcgttcgcgctcacccggtcgcagacgccaccgctcacgctccagctccaattcctcc
cggtag

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