Oncorhynchus kisutch (coho salmon): 109866058
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Entry
109866058 CDS
T09179
Name
(RefSeq) neuronal PAS domain-containing protein 4-like
KO
K26457
neuronal PAS domain-containing protein 4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109866058
Transcription factors [BR:
oki03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
109866058
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_11
PAS_3
PAS
PAS_9
PAS_2
HLH
Motif
Other DBs
NCBI-GeneID:
109866058
NCBI-ProteinID:
XP_031655830
Ensembl:
ENSOKIG00005029356
LinkDB
All DBs
Position
LG20:complement(69925..77889)
Genome browser
AA seq
921 aa
AA seq
DB search
MVLLRRSTKGASKARRDQINSEIRNMRTLLPIPQEDQDRLSYLHSMAVITAYIRKSFLYK
GLSADQSRLSSSSSYPLYETFLPAVHGFIVILSSRGRLVYVSENVSDYLGLSMVDVLQGD
TFYDLVESQDVETVRSNLETDNTTSTAERSFVCRMHTSKAFRLEYGNCCSIMVRGRYQTI
PQSPQSTPTSSPDRGRSAPPVDRVFLALCTPTVNHLGNSIFSSCSSSFTSLHRPDMSFSH
LDESVVFYLGYSSEELIGRSWYSLLHPEDLSLSAYSHKSLMQADEGRQMEMVLRLQHSDL
SWSWIYTRAAKHSGNQEVSCCNYIISETEAMYLRKNIHSDAFRASPPQPYCPSPTPQLTQ
SCCPTRDLKRQRAFSQCSSISETENRSKTSRRQRAESNAVFYVTSCSSSSQASPVAAFST
PPYSPTSSHYSSSHSPSQQDDTSSDSLLDVYGYTENLTSYYHCPGGGTEVGTGPSCLLSP
SRSFQPGSEQSFHQGIFSQTDAFSPQSCPSSPQHDCPACPADARLVPDCLSVSDLLESSA
DCPITIHTEDYSLSVQPQGGATSPYSLSVQPQGGATSPYSLSVQPQGGATSPYNLSVQPQ
GDATSPYSLSVQPQGDATSPYRLSVQPQGDATSPYSLSVQPQGGATSPYSLSVQPQGDAT
SPYSLSVQPLGDATSPYSLSVQPLGDATSPYSLSVQPQGGATRTYQSHHIPQTVAPPIRG
LLTPNPSPTSDLSFLYSDRDKVEISILAQQISSLASSFDLFNTLSPIQTPHQPSSEPLPW
AQLPGHSPVPLCIKPELVLDEGVFDSLLKDLSMVQGPGSLSHCYQPQDPSTLALSSLVDP
LSMEQSCRTLSLPLELPSSLSLSLPLQHPLSLSLSLPLDPFHPNLDPFSLRTSCHNQTSE
LHQLNLPHSLHQDGLVEESMY
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggtgttgctacgcaggtctactaagggagcgtctaaagccaggagggaccagatcaac
tctgagatcaggaacatgagaactctgctccccatccctcaggaggaccaggacagactg
tcatacctccacagcatggcggttatcacagcatacatcaggaagagctttctgtataag
ggattatcagctgatcagagtcgtctctcctcttcctcctcctatcctctgtatgagacc
ttcctcccagccgtgcatggtttcattgtgatcctctcctcccggggcaggctggtctac
gtctctgagaacgtctctgattacctggggctctccatggttgatgttcttcagggagac
acattctatgacctggtggagagtcaggacgtggagacagttagatctaacctggagaca
gacaacacaacgtcaactgcagagaggagttttgtgtgtcggatgcacacctccaaggcc
ttcagactagagtacggtaactgctgttctataatggtccgaggacgctaccagaccatc
ccacaatccccccagtccacccccacatcctccccagaccgtggccgatctgccccccct
gtggacagggtgttcttggctctctgcacacccacagtgaaccacctgggcaacagcatc
ttctcctcctgctcctcctccttcaccagcctccatagaccagacatgagcttcagtcac
ctggacgaaagtgttgtgttttacttgggctactcatcggaggagctgattggtcgatcg
tggtacagcctcctccaccctgaagacctctccttgagtgcctactcacataagagtctg
atgcaggcagacgagggtaggcagatggagatggttctgaggctccaacacagcgacctc
tcatggtcctggatctacactagagccgctaagcattctgggaaccaggaagtgagctgc
tgtaactacattatcagtgaaacagaagccatgtatctgaggaaaaacatccacagcgat
gctttcagagcctctcctcctcagccctactgcccctctcccaccccccagctgacccag
agctgttgccccaccagggacctaaagagacagagagcattcagccagtgcagtagtata
tctgagactgagaacaggtctaagaccagcaggagacagagagcagagtctaatgctgtg
ttctacgtgacatcatgtagctcctcctcccaggcctcacctgtcgccgccttctccacc
cctccctacagccccacctcctcccactacagctcctcccactctccatcacagcaggac
gacaccagctctgactctctgttggatgtgtatggctacacagagaacttaacctcttac
taccattgccctgggggagggactgaggtagggactgggccttcctgcctcctctccccc
tctaggtccttccagcctggctcggagcagtccttccaccagggtatattcagccagact
gacgcattctctcctcagtcctgcccttcttctccccagcatgattgcccagcatgccct
gctgatgcccggctggtccctgactgtctatctgtatcagacctgttagagagttcagca
gactgccccatcaccatccatactgaagactacagcctctctgttcagccacaaggtggt
gccaccagtccatacagcctctcggttcagccacaaggtggtgccaccagtccatacagc
ctctcggttcagccacaaggtggtgccaccagtccatacaacctctcggttcagccacaa
ggtgatgccaccagtccatacagcctctcggttcagccacaaggtgatgccaccagtcca
tacaggctctcggttcagccacaaggtgatgccaccagtccatacagcctctcggttcag
ccacaaggtggtgccaccagtccatacagcctctcggttcagccacaaggtgatgccacc
agtccatacagcctctcggttcagcctctaggtgatgccaccagtccatacagcctctcg
gttcagcctctaggtgatgccaccagtccatacagcctctcggttcagccacaaggtggt
gccaccaggacataccagagccaccatatacctcagactgtcgctcctcctattagaggc
ctgctgacccctaacccctccccgacctccgacctctccttcctctacagtgacagagac
aaggtagagatcagtatcctagcccagcagatctcctctctggcctccagcttcgacctg
ttcaacaccctgagccccatccagaccccacatcagcccagctcagaaccccttccctgg
gcacagctcccaggtcactcccctgtccccctctgcatcaagccagagctggtgctggat
gagggagtgtttgatagtctcctgaaggatctgagcatggttcagggacctgggagtctg
tctcactgctaccaacctcaggacccttccaccctggctctgtcttctctagtggaccct
ctatccatggagcagtcatgccgcactctctccctccccctggaactcccctcatccctc
tctctctccctccccctgcaacaccccttgtccctctctctctccctccccctggaccca
tttcaccctaacctggatcccttctctctgaggacaagctgtcataatcagacctctgag
ttgcatcaactcaacctgccccacagtctccatcaagatgggcttgttgaagaatccatg
tactga
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