Oncorhynchus kisutch (coho salmon): 109866300
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Entry
109866300 CDS
T09179
Symbol
smc6
Name
(RefSeq) structural maintenance of chromosomes protein 6 isoform X3
KO
K22804
structural maintenance of chromosomes protein 6
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oki03400
]
109866300 (smc6)
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
109866300 (smc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
ACBP4_C
Cast
AAA_13
Crescentin
TMF_TATA_bd
OVT1
AAA_29
AAA_21
GalA_N
Motif
Other DBs
NCBI-GeneID:
109866300
NCBI-ProteinID:
XP_020310478
Ensembl:
ENSOKIG00005021390
LinkDB
All DBs
Position
LG21:complement(24370857..24389250)
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AA seq
1091 aa
AA seq
DB search
MSKRKSNSIGESPHKRVRPTEVHDEDNEVGPSQPPLPLGSHTTVGEVGIVESISLKNFMC
HSLLGPFAFGSNVNFVVGNNGSGKSAVLTALMVGLGGKATTTNRGSSLKGFVKEGESSAD
VSITLRNKGRDAYKPEVFGQAIIVDLKITREGMRTYKLKSKAGHLVSAKKDELLAILDHF
NIQVDNPVSMLTQEMSKHFLHSKGEGDKYRFFMKATQLEQMKEDYTYIITTKNVTLDTVE
KHEECLEGLKRKYLEKEDRVKSLASLDDMHSKLEELKNQMAWALVSEMEKEVKPMREKLQ
SEERSTIKYDQKVDEWKAKVVEAEKKYKGIREQLEAITVRVQQLEPQSAELKNEAQSRSK
AFNTAQASVHRFKTNLRDLEKDKDQLSRRINELKLSISQTSGAETQVRVERMEKLQTDLD
TLNFQDSTLGQQMEQFQQAVSRAKDELEKMMREEEDLKRSMEAIRRKLQTMEGSRSDRLR
RFGEKMPALLAAIEDADRKGQFRKKPVGPLGYCIRLKDHEQALAVEKCLGSLMVAFTCDN
HEDEKLLQGLMRGYYQGGRRPQIITCQFFNRVHDTSRRAVNHPDYPSVLQSLEIEDPVVA
NCLIDQRGIETILIIKSPAEARRVMQGRQPPRNCYQAFTKEGDQCYNNRYYSNDQRRCDY
LSRDVEEEIRQLQEEMQNKEAHLDRFSQQKQRVEEDIRNNNSLLKRAYDDRKRAKDKFRR
LQQEISDLQNVEEPQSEDLKPLEEELEEINNKISAGRAESEEARRKMAQLKASWEEVEQR
YRQHKDSISTVAEEAEPIKEELSKSDQDVEKSKHHKKHYEDKRKVHINTIQALKASLDLK
EQELTASVVKATEICPERSEVRRTARSLDSEISRLKLKISTQQDQQGDREEVIRQYQEAL
VNYSNINQQVKCLKRFIQVLCKIMDDRHRVYTELRRFLSVRCKMYFDSMLSQRGYIGKMM
FEHKNETLSISVQPGVGDKAALSDMRSLSGGERSFSTVCFVLSLWAIAEAPFRALDEFDV
YMDMVNRRISMDMMLKIASSQRYRQFIFLTPQSMSSLPVNNLIRILRLKDPDRGQTALPF
GQRNEEEEEEE
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagaggaagagcaactcaattggagagagcccacacaagagagtcagacccaca
gaggttcatgatgaagataatgaagtgggtcccagccaaccccctctgccactaggatcg
catacgactgttggagaggtgggcatagtggagagcatctccctgaagaactttatgtgc
cactctctgctgggaccatttgcgtttgggtccaatgtcaactttgtcgtcggcaacaat
ggaagtggaaagagtgctgtcctcacagctcttatggtgggcctgggagggaaagctaca
accacaaacagagggtcctccctgaagggatttgtgaaagaaggagagagttcagctgac
gtctccataacactgcgtaacaagggcagggatgcctacaagccagaagtgttcggccag
gctatcatagtagacctcaagataacccgtgagggcatgaggacctacaagctcaagagc
aaagcaggtcatcttgtgtctgcgaagaaggatgaacttttggccattctggatcacttt
aacatccaggtggataaccctgtatctatgctaactcaagagatgagcaagcactttctg
cactccaaaggagaaggggataagtacagattttttatgaaagccacacagcttgagcag
atgaaagaggattacacctatatcataacgactaaaaatgtcactctagacactgtggag
aaacacgaggagtgtctggaggggttaaagaggaagtacctggagaaagaggaccgggtc
aaaagcctggcctcgctggacgacatgcacagtaaactggaggagctgaagaatcagatg
gcttgggctctggtgtctgagatggagaaagaggtgaagcccatgagagagaagctccaa
tcagaggagaggtccaccatcaaatacgaccagaaagtagacgagtggaaggccaaggtg
gtggaggcggagaagaagtacaagggtatccgggagcaactggaggccatcactgtgagg
gtgcagcagcttgagccacagagtgctgagctgaagaacgaggctcagagcagaagcaag
gccttcaacacagcccaggccagtgtacacagattcaagaccaacctgagagacctggag
aaggacaaggatcagctctccaggagaattaatgaactcaagttgagtatcagccagacg
tctggtgcggagacccaggtgcgtgttgagcgcatggagaagctgcagacagacctggac
actctgaacttccaggactctaccctaggtcagcagatggaacagttccagcaggctgtg
tcccgggccaaggacgagctggaaaagatgatgcgagaggaggaggatctgaagaggtct
atggaggccatcaggaggaagttgcagaccatggagggcagccgctccgaccgcctgcgc
cgcttcggggagaagatgcccgcgctgctcgccgccatcgaggatgccgacaggaagggc
cagttcaggaagaaaccagtggggccgctggggtactgtatccgtctgaaggaccatgag
caggccctggccgtggagaaatgtcttgggagcctgatggtggccttcacctgtgacaac
cacgaggacgagaagttgctgcagggccttatgagagggtactaccaggggggtaggaga
ccccagatcatcacctgccagttcttcaacagggtccatgacaccagtaggcgggctgtg
aaccaccctgactacccgtcagtcctacagtctctggagatcgaggacccagtggttgcc
aactgcctcatcgaccagaggggcatagagaccattctgatcatcaagagtcctgcagag
gcccgcagagtgatgcagggcaggcagccccctagaaactgctaccaggctttcaccaag
gagggagaccagtgctacaacaaccgctactactccaacgaccagaggaggtgtgactac
cttagcagagacgtagaggaggagatcaggcagttgcaggaagagatgcagaacaaggag
gcccacttggatcggttcagccagcagaagcagagggtggaggaggacatcaggaacaac
aacagtctcctgaagagggcctacgacgacaggaagagggccaaggataagttcaggaga
ctgcagcaggagatcagtgacctgcagaacgtggaggaaccccagtctgaggacctcaag
cctctggaggaggagctggaggagatcaacaataagatttcagcaggtcgtgcggagagc
gaggaggcccgtagaaagatggcccagctgaaggcttcctgggaggaggtggagcagagg
taccgccagcacaaagactccatcagcactgtggccgaggaggccgaacccatcaaggag
gagctgagtaagagcgaccaggatgtggagaagagcaagcaccataagaaacactacgag
gacaaacgcaaggtccacatcaacaccatacaggccctgaaggccagcctggatctcaag
gagcaggagctcacggcttctgtagtgaaggccacagagatctgtccagagcggtccgag
gtgcgccggacagccaggagtctggacagcgagatcagccgtctgaagctgaagatcagc
acccagcaggaccagcaaggcgaccgcgaagaggtcatcaggcaataccaagaggccctt
gtgaactacagtaacattaaccagcaggtgaagtgcctcaagcgcttcatccaggtcctg
tgtaagatcatggacgatagacaccgagtctacacagagctgaggaggtttctctcagtg
cgttgcaagatgtactttgactccatgctgtcacagagaggctatatagggaagatgatg
ttcgagcacaagaacgaaaccctatccatctcagtccagccaggtgtgggggataaggct
gctctgagtgacatgcgctctctgtctggaggagagcgctcgttctccactgtctgtttc
gttctctctctctgggccatcgctgaggcccccttccgcgccctcgatgagtttgacgtc
tacatggacatggtgaaccgaaggatatccatggacatgatgttgaaaatcgcttctagc
caacgttaccgacagttcatattcctcaccccacagagcatgagctctctcccagtcaac
aacctgatccggatcctgcggctgaaagacccggaccgtggccagacggctcttcccttt
ggacagaggaatgaggaagaggaagaggaggagtga
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