Oncorhynchus kisutch (coho salmon): 109866309 Help Entry 109866309         CDS       T09179                                  Name (RefSeq) 5'-3' exoribonuclease 2   KO K12619   5'-3' exoribonuclease 2 [EC:3.1.13.-] Organism oki  Oncorhynchus kisutch (coho salmon) Pathway oki03008   Ribosome biogenesis in eukaryotes oki03018   RNA degradation Brite KEGG Orthology (KO) [BR:oki00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     109866309   09123 Folding, sorting and degradation    03018 RNA degradation     109866309  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:oki03021]     109866309    03019 Messenger RNA biogenesis [BR:oki03019]     109866309    03009 Ribosome biogenesis [BR:oki03009]     109866309    03016 Transfer RNA biogenesis [BR:oki03016]     109866309 Transcription machinery [BR:oki03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      109866309 Messenger RNA biogenesis [BR:oki03019]  Eukaryotic type   mRNA degradation factors    5'-3' decay     5' exonucleases      109866309 Ribosome biogenesis [BR:oki03009]  Eukaryotic type   Pre-60S particles    RNases     109866309 Transfer RNA biogenesis [BR:oki03016]  Eukaryotic type   tRNA degradation factors    Rapid tRNA decay (RTD) pathway factors     109866309 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  XRN_M XRN_N Motif Other DBs NCBI-GeneID:  109866309 NCBI-ProteinID:  XP_020310498 Ensembl:  ENSOKIG00005042333 LinkDB All DBs Position LG21:complement(11889317..11920105) Genome browser AA seq 956 aa AA seqDB search MGVPAFFRWLSRKYSTIVVHCTEERSKECNGVRIPVDTSKPNPNEVEFDNLYLDMNGIIH PCTHPEDKAAPKNEDEMMVAIFEYMDRLFNIVRPRRVLYMAIDGVAPRAKMNQQRSRRFR ASKEGVELVEEKSRIREEILGRGGYLPPDEIKERFDSNCITPGTEFMDNLAKCLRYYIAD RLSNDPGWRNITVILSDASVPGEGEHKIMDYIRRQRAQPHHDPNTHHCLCGADADLIMLG LATHEPNFTIIREEFKPNQPRPCAMCGQKGHEIKDCQGVAREKQGEHDEFADAMPASEQE FIFIRLCVLREYLERELTMASLPFPFDFERTVDDWVFMCFFVGNDFLPHLPSLEIREGAI DRLVGIYKDVVHKTGGYITENGFVKLESVELIMQAIGVAEDNIFKKRKEDDEGFKRRNKE KKKRMKAQQQGPSYLTSGQFAPQALGGRGRPEVVQNARHQAFDMRMQGRDQHNRAGTSDG QDGRGVKRKAEDSDSEPDPEDNVRLWEDGWKQRYYKTKFDVDATDDDFRKKVVMSYVEGL CWVLRYYYQGCASWKWYFPFHYAPFASDFKDIKGMFTDFELGTKPFKPLEQLMGVFPAAS GNFLPETWRSLMSNPESSIIDFYPDDFAIDLNGKKYAWQGVALLPFVDERRLRAALAEVY PNLSPEENKRNSLGSDMLFVGKSHSICDFIQELYRGESHEGTEMPAELCHGIQGILNLDG DPILPDKPVESPIPMLRDIAQNSAIGVKYKDPQFGETFVFKAVILHGAKIPAKVLKPGDW ERGNRGRGNWRPQLGFNSNRQQVHLDQSAFRALGHSINRQQQGGGQYSNAPPPGNYHQGN YSRPPHSGGGHFSHSRQQGLLGAPPPFNPVQQYPRQQYSGSGGHGWDRSMQSQGAAYQQN MQRGGHGGGQGQGGYHQQRGQDDRRGDRRDDRGGQPGYSAGRNYPLPPPARRYNWS NT seq 2871 nt NT seq  +upstreamnt  +downstreamnt atgggagtccccgcattttttcgttggttgagtcggaaatattctacgattgttgtccat tgtactgaggagaggtccaaggaatgcaacggtgtacggattcctgttgataccagcaaa ccgaatccaaatgaagtggagtttgacaatttgtacttggatatgaatgggatcattcac ccctgtacacatcctgaagacaaggctgcacccaaaaatgaagatgaaatgatggttgcc atctttgaatacatggatcggctcttcaacattgtgcggcccagaagggttctttacatg gctattgatggagtggcccctcgtgccaaaatgaaccagcagaggtccaggcgattccgt gcctccaaggaaggagtggaactggttgaggagaaatcccgcatccgagaggagatcctc gggagaggagggtatcttccacctgatgaaatcaaggagagatttgacagtaactgtatc accccaggcacagagttcatggacaaccttgcaaagtgtctccgttactacattgcagac agactcagtaatgaccctggatggcgtaacattacagtcatattgtctgatgccagtgtc cctggtgagggggagcataagatcatggactatatcaggcgacagagagctcagcctcac catgaccccaacacacaccactgtctttgtggagctgacgctgaccttatcatgctgggc cttgccactcacgagcccaatttcaccatcatccgagaggagttcaagcccaaccagccc aggccctgtgctatgtgtggacagaaaggccatgagatcaaggactgccagggagtggcc agggagaaacagggagagcatgatgagtttgcagacgctatgccggcttctgaacaggag ttcatattcatcaggttgtgcgttttgcgtgagtacctggagcgagagttgacaatggcc agtctgccctttccctttgactttgagaggaccgttgacgactgggtcttcatgtgcttc ttcgttggcaatgatttcctgcctcatttaccgtccttagagattagagagggtgcgata gatcgactggtgggcatctacaaagacgttgtgcacaagactggggggtacatcacagag aatggctttgtcaagttggagagtgttgagttgatcatgcaggcaatcggtgtggctgag gacaacatcttcaagaaacgcaaagaggatgatgagggattcaagcgaaggaataaggag aaaaagaagaggatgaaggctcagcagcagggcccatcctacctgaccagcggtcagttt gccccccaggcccttggcggcagaggcagacctgaggtggttcagaatgcccggcaccaa gccttcgatatgcggatgcagggaagggaccagcacaacagggcagggaccagtgatggg caggatggccggggtgtgaagcggaaagccgaggacagcgacagcgaaccagatcctgaa gataacgtcaggttgtgggaggatggctggaagcagcgatactacaagaccaagtttgac gttgacgcgactgacgatgattttcgcaaaaaggtggtcatgtcctacgtggaaggtctc tgctgggtcctgaggtactactaccaggggtgcgcatcctggaagtggtacttcccgttc cactacgccccgttcgcctcagacttcaaagacatcaaaggcatgttcaccgacttcgag cttgggaccaagccgttcaagcccctggagcagctgatgggtgttttccctgctgccagt ggaaatttcctgcccgaaacatggcggtcactcatgagcaatccagagtcctcaatcatt gacttctaccctgatgactttgccattgacttgaatggaaagaagtatgcttggcaaggt gttgcattgcttcccttcgtggatgagcgccgtctcagggcagccctggctgaagtctac ccaaacctctctccagaggaaaacaagaggaacagccttggcagtgatatgctgtttgtg gggaagtcccattctatctgtgacttcatccaggaactgtaccgtggagaatctcacgag ggcaccgagatgccagcggaactatgccatggaattcaaggtatattaaatcttgacgga gaccctatcctaccagataaaccagtggagtctcccatccccatgctacgggacattgca cagaacagtgccattggagtgaaatataaggacccacagtttggagagacctttgtgttc aaggctgtcattcttcatggagcaaagattcctgccaaggtgctgaagcctggagactgg gagaggggtaaccgtggtaggggtaactggaggccccaactgggcttcaactccaaccgg cagcaggtccatctggaccagtcagccttcagggccctgggtcacagcattaaccgacag cagcagggaggtgggcagtacagcaacgctccaccccctggcaactaccaccaggggaac tacagcaggcccccccacagtggtggtggtcacttctcacattccaggcagcagggtctt ctaggggcacctcccccattcaaccctgtacagcaatatccaaggcagcagtatagtggt agtggtgggcacggctgggaccggtcgatgcagtcccagggagctgcctaccagcagaac atgcagagaggaggccatggaggggggcagggtcagggtggctaccaccaacaacgtggt caggatgaccgtagaggagaccgcagagacgaccgtggaggacaaccgggatacagcgct ggacggaattaccccttgccacccccagcaagaagatacaattggagttaa

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