Oncorhynchus kisutch (coho salmon): 109866320
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Entry
109866320 CDS
T09179
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1-like isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
109866320
Enzymes [BR:
oki01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
109866320
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Gene cluster
GFIT
Motif
Pfam:
GDPD
CBM_20
C2_GDE1
TreTu_C
Motif
Other DBs
NCBI-GeneID:
109866320
NCBI-ProteinID:
XP_020310523
Ensembl:
ENSOKIG00005037152
UniProt:
A0A8C7MXI2
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All DBs
Position
LG21:complement(28960266..28979600)
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AA seq
672 aa
AA seq
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METTQVTLAVRGDTSPGEVIAVVGSCEALGAWCYQRAVTLQPAEHNGTLWKRIISVPRGA
VSTYRYFKGHFLESKSAGGPCQVIVTKWETHQQPRLMSPTESHLDIDNGQFGFHNGLECV
DSGWLTCQTEIRLRLHYSKTSPVSITKKKYKKSRFRIKLTLEGVEEEEDDEEQEQSAVAW
HKMTTTLETSMISGDGYKSRHSQPECGYALEASQWTEYVIHSMDPDNLELTFDFFEEDMG
EHVVPGDAHPGTVGTACLLSSFFVESGKDTGVVTLPIMKRNSRQTLGKVRVDYLVIRPIE
GLQCDMSSSFTKYWRKRSAPLDVGHRGAGSTHAAKHTKVRENTIASFKSAANHGAAYVEF
DVHLSKDCVPIVYHDLTCCISTKKKGDKLSLDLFEVPVKDLTYDQLQQLKLGHASALKVN
DHKDDDEEEEVDEHQPFPSFSQIFQAVPENVGFNIELKWVCQMRDGSWEGNLSSYFNMNL
FLDIILTCVLQRAGKRRIVFSCFDPDVCTMVRQKQNKYPILFLTQGISEIYPELMDIRCR
TTQIAMSFAQSENLLGISAHTEELLQNLEHIREAQSKGLVVFCWGDLNNDHDNRTKLREQ
GIDGLIYDRICDDQVEQPNIFKVEEQHTLQETLKSFVCSCYTIPCQAAPVCPSSTSKEHN
GSAESDSGLSSS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggagacaactcaagtgactttggcagttaggggagacacatccccaggtgaggtgata
gccgtggttggtagctgtgaagctttaggagcctggtgctatcagagagctgtgacccta
caacctgctgaacacaatggcacattgtggaagaggatcatcagtgtgcccagaggtgct
gtgtcaacctatcgctatttcaaaggccacttcctggagtcaaagagtgcaggtggtccc
tgtcaggtgatagtcactaagtgggagacccaccagcagccacgcctgatgagccccaca
gaatcacaccttgatattgacaatggccaatttggattccacaatggcttagaatgtgtg
gactctgggtggctgacgtgccagacagagatccgtttgcgtctgcattactcaaagacg
tctcctgtatccatcaccaagaagaaatataagaagtctcgcttcaggatcaagctgaca
ctggaaggtgtagaggaggaggaggatgatgaagagcaggagcagagcgcggtggcgtgg
cacaagatgaccaccacgctggagaccagtatgatcagtggagatgggtacaagtcccgc
cactcccagcctgagtgtggttacgccctggaggcctcacagtggacagagtatgtcatc
cactccatggaccctgacaacctggaactcacctttgacttctttgaggaggacatgggt
gagcatgtggtgccaggggatgcccacccggggaccgtgggtacggcctgccttctctcc
tcattctttgtggagagtggcaaggacacgggtgtggtcactctgcccatcatgaaacgc
aactccagacagaccctgggcaaagtccgagtggactacctggtgatccgtcctatcgag
ggactgcagtgtgacatgagctcgtccttcaccaagtactggaggaagaggagtgcccct
ctggacgtgggccacagaggggccggcagcacacacgcagccaaacataccaaagttagg
gagaacacaattgcctcgtttaaaagtgctgccaatcatggggctgcctatgtagagttt
gacgtccatctctccaaggactgcgtccccatcgtgtaccacgatctcacctgctgcatc
tccactaagaagaaaggagacaaactctctctggacctgtttgaagttcctgtcaaagac
ctcacatacgaccagcttcagcagctcaagttgggccatgcttctgccttgaaggtgaac
gaccacaaagatgatgatgaagaggaagaggttgacgagcatcagcccttcccttccttt
tcccagatattccaagcagtgcctgaaaatgtgggcttcaacatcgagctgaagtgggtt
tgtcagatgagggatggttcgtgggaaggaaacctgtcctcgtacttcaacatgaacctg
ttcctggacatcatactgacctgtgtgctgcagagagctggcaagagacgcatcgtcttc
tcctgcttcgaccctgacgtctgcactatggttcgtcagaagcagaacaagtaccccatc
ctgttcctgacccagggcatctctgagatctacccggagctcatggacatccgctgtcgc
accacacagatcgccatgagcttcgcacagagcgaaaacctcctgggtattagtgcccac
actgaggagctccttcagaatctggagcacatccgagaggcccagtctaaaggcctggta
gtgttctgctggggagacctcaacaacgaccacgacaacaggaccaagctacgggaacag
ggcattgacggtctcatctacgacaggatctgtgacgaccaggtcgagcagcctaacatc
ttcaaagtagaggagcagcacacgctgcaggaaacgctcaagagctttgtgtgttcctgc
tacaccatcccctgccaggcggctcctgtctgcccctcctccacctccaaggagcacaac
ggcagtgcagagtctgactcgggcctcagctcctcctga
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