Oncorhynchus kisutch (coho salmon): 109866366
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Entry
109866366 CDS
T09179
Name
(RefSeq) protein SOGA3 isoform X2
KO
K27704
microtubule cross-linking factor
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109866366
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
109866366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
APG6_N
TSC22
Cnn_1N
Halo_GVPC
Metal_resist
Motif
Other DBs
NCBI-GeneID:
109866366
NCBI-ProteinID:
XP_020310599
Ensembl:
ENSOKIG00005015690
LinkDB
All DBs
Position
LG21:22757186..22771035
Genome browser
AA seq
878 aa
AA seq
DB search
MDDTMNSAASGAADFPVAASDNSTARLHRAPSPTKSRECALKPAQKSSSRSKNIVSKGGS
RNKVGNEGLRTAVVREKECDVEAFHSDGAETDAVNCNAKKADASREEGTEEIFHQPIDSQ
TRRSSLRLSCLKGESSQHIGSYRSDGSSTAGSVKGKAKKRGGEAVTASAGCRRNRSGEYV
GCVPGIGLWSGGCLQTELIHFHLHKKLKRSGSKMHTKAERAPGAEASAETEPATEAIEAE
PVTQQDEGPEDELERLVDENEDLKTEIEEMRTEMDEMRDTFYEEDTCQLQEMRRELERAN
KNCRILQYRLRKAERKKLRYAQTGEIDEELLRSLEQDLKVAKDVSVRLHHELENVEEKRT
KTEDENEKLRQKLIEVEVTKQALQNELDKVKESQKRRGSKEVQRSDKKSAQTPTEDHNED
LKCQLAFIKEEAVLMRKKTAKIDKEKDRLEAELQKYRSFYGDLDSPHPKGEAGGPPSTRE
SELKLRLRLVEEEANILGRKIVELEVENRGLRAELDDLRGEGEGEGGSGGGAVGRVGVGR
GHGEAMTELRQQLQLVEDEAELLRRNLADAEDHNKRVMGELNKLRFKAGTHEGGARHGGG
VAGGGGLSTEKADALQEELKTARLQINDLSGKVMQLQYENRVLLSNMQRYDLASHLALRG
CTSPRDSDADSDAGGTGPTVQRESDDDSSSSRILPPHRKREGPVGGESDSDEVRNQTRCL
TPTRGLYTPPPEVAARFLPRSPRDRQQMIDIRVEAERLGRTIDRLIADTATIIAEARVYV
SNGDLYGRGSGGEEEDEGGRIREHELLYRINAQMKAFRKELQGFIDRLEVPKPEDREEEP
LSMFQPIILLILILVLFSSLSYATIFKLVFLFTLFFVL
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggatgacacgatgaactctgccgcaagcggcgctgcggattttccagtggcagcatca
gacaatagcacagcgaggctgcatcgggctccctcaccgaccaaaagccgggaatgcgcc
ctaaaaccggcccagaaatcctccagtagatccaaaaatatagtttccaaaggaggatcg
aggaataaggtgggaaacgaggggcttaggaccgctgtcgtgagggagaaggaatgcgac
gtggaagcttttcactcggatggtgctgaaaccgatgctgtcaattgcaatgcaaagaag
gcggatgctagcagagaggaaggtacggaggagatatttcaccagccgatagattctcaa
acccgtcgttcctcgttacgtttatcctgcctcaaaggcgagtcttcccaacatattggg
tcataccggtcagacggctccagcacggcgggttcggtgaaagggaaagcgaagaagcgg
ggaggggaggcagtgacagcatcagcaggctgccgcaggaatagaagcggggaatacgtg
ggctgcgtgccgggcattggtctgtggagcgggggttgcttgcagactgaactcatccac
ttccacctacataagaaactgaagagaagcggcagtaagatgcacaccaaggcagaaagg
gctccgggcgcggaggcctcggccgagacggaaccggctacagaggccatagaggcggag
cccgtgacacagcaagacgagggcccggaggacgagctggagagactggtggatgagaat
gaagatctcaagacggagatcgaggagatgaggacggagatggacgagatgcgtgacact
ttctacgaggaggacacgtgccagctgcaggaaatgaggcgtgaactggagcgagccaat
aagaactgccggatcctccagtaccggctgaggaaggctgagaggaagaagctgcgctac
gcccagacaggagagatcgacgaggaactactgaggagcctggagcaggacctgaaggta
gcgaaggatgtgtctgtgaggctccaccatgagctggagaatgtggaggagaaacgtaca
aagacagaggacgagaatgagaaactgaggcagaaactcattgaggtggaggtgaccaaa
caggcccttcagaatgagctggacaaagtcaaggagtcacagaagagaagaggaagcaag
gaggttcaacggtctgacaagaagtctgcccagaccccaacagaggaccacaatgaggac
ctcaagtgccagcttgcttttatcaaggaggaggccgtgttgatgaggaagaagacagct
aagatcgacaaggaaaaggaccggctggaggcggagctacagaagtaccgctccttctac
ggggatctagacagcccccaccccaagggtgaggccgggggaccccccagcacccgtgag
tccgagctgaagctgcgtttgcgtctggtggaggaggaggctaacatcctagggagaaag
attgtggagctggaggtggagaaccggggactgagggccgagctggacgacctcagggga
gaaggggagggagaaggggggtccggtggcggggctgtgggcagggtaggggtgggccgg
ggccatggggaggccatgacagagctgaggcagcagctgcagctggtggaggacgaggca
gagttactgaggaggaacctggcagacgctgaggatcacaacaagagggtgatgggagaa
ctcaacaagctaaggtttaaggctgggacccacgagggaggagcgaggcatggaggaggg
gtggcaggaggaggaggactaagcacagagaaggcagatgcactgcaggaagaactgaag
acggcccggctacagattaatgatctcagtgggaaggtgatgcagctgcagtatgagaac
cgtgttctgctctccaacatgcagcgctatgacctggcctcccacctggccctgaggggg
tgcacaagcccccgggacagcgatgcagacagtgacgcgggtgggaccggcccaaccgtg
cagcgcgagagtgatgatgactcctcctcctcccgcatcctgcccccgcaccgcaaacgc
gagggcccagtgggcggggaaagtgactcagatgaggtgcggaaccaaacccgctgcctc
acacccacccgaggtctctacacaccgcccccagaggtcgccgcccgcttcctgccccgc
agcccacgggatcgccagcagatgatcgacatccgggtggaggcggagcgtcttggcagg
accatcgaccggttaattgctgacacagcaaccatcatcgcagaggcgcgggtgtacgtt
tccaatggtgacctgtacgggcgaggcagcgggggtgaggaggaggatgaggggggtagg
atcagggagcatgagctgctgtacaggatcaatgcccagatgaaggccttcaggaaggag
ctacagggcttcatagacagactggaggtgcccaaacctgaggacagggaggaggaacca
ctttcgatgtttcagcccataattttactcatcctcatactagtcttattctcctccctc
tcctatgccaccatctttaaacttgtctttctgtttacccttttcttcgtcctgtga
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