Oncorhynchus kisutch (coho salmon): 109866395
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Entry
109866395 CDS
T09179
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1 isoform X1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03410
Base excision repair
oki04210
Apoptosis
oki04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109866395 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
109866395 (parp1)
04217 Necroptosis
109866395 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oki03032
]
109866395 (parp1)
03036 Chromosome and associated proteins [BR:
oki03036
]
109866395 (parp1)
03400 DNA repair and recombination proteins [BR:
oki03400
]
109866395 (parp1)
Enzymes [BR:
oki01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
109866395 (parp1)
DNA replication proteins [BR:
oki03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
109866395 (parp1)
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
109866395 (parp1)
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
109866395 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
109866395
NCBI-ProteinID:
XP_020310640
Ensembl:
ENSOKIG00005019712
UniProt:
A0A8C7MEJ1
LinkDB
All DBs
Position
LG21:23812634..23824400
Genome browser
AA seq
1016 aa
AA seq
DB search
MADAQEDKLYKAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWL
RASAQSPADIAGFSDLRWEDQEKVKKAIETGGAAGGKGDVKGGAKGEKTLNDFAVEYAKS
NRSTCKGCEQKIEKDQIRVSKKTIDPEKPQLGLIDRWYHTACFVGRREELVFKPEYSAAQ
LKGFNTLRVEDKEELKRRLPAVKSKGKRETDEVDGEGASKKKKDEEEKKKVDLQMKEQSQ
LIWGIKDKLRQFCSTNDMKELLIANGQEVPSGESNVVDSLGDCMAFGALKPCEECQGQLV
FKSDAYYCTGDLSAWTKCVFKTQLPNRKGWVIPKEFHELPFLKKFKFKRQDRVFPKVAPP
PASSASAPVPSASSAPSIPLPEGAPADKPLTGMKLLTVGKLRQNKDELKAAVEELGGKIT
GTANKATLCLSTKKEVEKMSKKMEEAEEAGVRVVSEDFLTDIKSSGKALQELVSLHAISP
WGAEVKLETQAQSAASRSGAMAGKSTKRVKEEEAFSGVSKASKKMKLTVKGGAAVDPDSC
LENSAHVLDQNGKIFSATLGLVDIVRGTNSYYKLQLLEDDVHKRYWVFRSWGRVGTTIGG
NKLDKFHDKNSAMDNFLGVYEEKTGNAWGSSHFTKYPNRFYPLEIDYGQDEEAVKRLTAS
AGTNSLLARPVQELIRTIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYALLSEVQQ
AVSDSSSESHILDLSNRFYTLIPHDFGMKKPPLLSNLDYIQAKVQMLDNLLDIEVAYSLL
KGGAEDNKKDPIDINYEKLKTKIEVVDKTTKEAEIILQYVKNTHAATHNTYTLEVEEIFK
IVREGEYQKYRPFQDLPNRQLLWHGSRATNYAGILSQGLRIAPPEAPVTGYMFGKGVYFA
DMVSKSANYCHTSQSDPTGLLLLGEVALGNMHELKKASHITKLPKGKHSVKGLGRNAPDP
SATVTLDGVQVPLGKGTNTNIDDTSLLYNEYIVYDVAQVNLKYLLKIKFNYQMSMW
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgcacaagaggacaagctttacaaagctgaatatgccaaaagtggacgtgct
tcgtgcaagaaatgcaaggaaaacatagcaaaggattcgctgcggatggctatcatggtg
cagtcgcccatgtttgacggtaaggtgccccactggcaccacttctcctgcttctggctg
cgggcgtctgcccagtctcctgcagacatcgctggattctctgacctgcgatgggaggac
caggagaaggtcaagaaggccatcgagactgggggagctgcaggaggaaaaggtgatgtg
aagggtggggccaaaggggagaagactctgaatgactttgcagtggagtatgccaagtcc
aatcgcagcacatgtaaagggtgtgagcagaaaattgaaaaggaccagatccgtgtatct
aagaagacgattgacccagagaagccccagctggggttgatagaccgctggtaccatacc
gcctgctttgtgggccgcagggaggagctcgtcttcaaaccagaatacagtgccgctcag
ctcaaaggctttaacacactcagggtggaggacaaggaggagctgaagagaaggctgccc
gccgtcaaatctaaaggaaagagagagactgatgaggtagatggagaaggggcatcgaag
aagaagaaggatgaggaggagaagaagaaagtggacttgcagatgaaggagcagagccag
ctgatctggggcatcaaggacaagctcaggcagttctgttctaccaatgacatgaaggag
ctgctcatcgccaacggacaggaagtgccctctggagagtccaatgtggtggacagccta
ggagactgcatggcctttggcgcactgaagccctgcgaggagtgccagggccagctggtg
ttcaagagcgacgcctactactgcactggagacctctccgcctggaccaagtgtgtgttc
aagacccagctgcccaaccgcaagggctgggtcatccccaaggagttccatgagcttccc
ttcctcaagaagttcaagtttaagagacaggaccgggtgttccccaaggtggcccctccc
ccagcctcttctgcatccgctcccgtccccagtgcctccagtgctcccagtatacccctc
ccagagggagcccctgcagataagcctctgacagggatgaagttgctgactgtgggcaag
ctgagacagaacaaggatgagctgaaggctgctgtggaggagctgggcgggaagatcacc
ggcacagccaataaggctactctctgcctcagcaccaagaaggaggtagagaagatgagt
aagaagatggaggaggcagaggaggcgggcgtgcgcgtggtctcagaggacttccttact
gacatcaagtcctcgggcaaggccctgcaggagctggtctccctgcacgccatctccccc
tggggggccgaggtcaaactagagacccaggctcagtcagcagcctccaggtctggagcc
atggctggcaagagcaccaagagggtgaaggaggaggaagctttttcaggtgttagcaag
gccagtaagaagatgaagctgactgtgaaaggaggggcagcagtggacccagactcatgt
ctagagaacagtgctcatgtcctggatcagaatggcaagatcttcagcgctacgctaggt
ctggtggacatcgtcaggggaaccaactcctactacaaactgcagctgttggaggacgat
gtgcataaacggtactgggtgttccgctcctggggcagagtgggcaccaccatcggggga
aataagctggataagttccatgataagaactctgccatggacaacttcctgggtgtgtac
gaagagaagacaggaaacgcctggggctcttcccacttcaccaagtatcccaacaggttc
taccctctggagatcgactacggtcaggatgaggaggcggtgaagaggctgacagccagt
gctggtacaaactctctgctggccaggcctgtccaggaactcatcaggaccatctttgat
gtggagagcatgaagaaggccatggtagagtttgagattgacctccagaagatgccgctg
gggaagctgagtaagaggcagattcagagtgcctacgccctcctcagtgaggtgcagcag
gctgtgtcggacagttcctcagagtcccacattctggacctgtccaatcgcttctacacc
ctcatacctcacgactttggcatgaagaaaccaccgctgctcagcaaccttgactacatt
caggctaaggtccagatgttggacaacctgctggacattgaagtggcctacagtctgctg
aaaggaggggcagaggataacaagaaggaccctatcgacatcaactatgagaaactcaaa
accaagattgaggttgttgacaagaccacaaaggaggcagagatcattctgcagtatgtc
aagaacacacacgctgctacacacaacacctacacactggaagttgaggagatctttaag
atcgttagggagggagagtaccagaagtaccgccccttccaggatctgcctaatcgacag
cttctgtggcacggttctcgtgccaccaactacgctggtatcctttctcagggtctgcgt
atcgcccctcctgaagcccccgtgacgggttacatgtttggcaaaggtgtgtactttgcc
gacatggtgtccaagtcggccaactactgccacacctcccagtccgacccaactggccta
cttctactgggagaggtcgccctcggaaacatgcatgaactgaagaaggcctcacacatc
acaaaactacccaagggtaaacacagtgtgaaaggtttgggtcgaaacgccccagatcct
agtgccactgtcactttagatggggtgcaagtgcctctgggaaaaggaaccaacaccaac
atcgacgacacgagtctgctgtacaacgaatacattgtgtatgatgtggcacaggtgaac
ctgaagtacctgctgaagatcaagttcaactaccagatgtccatgtggtga
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integrated database retrieval system
