KEGG   Oncorhynchus kisutch (coho salmon): 109866462
Entry
109866462         CDS       T09179                                 
Name
(RefSeq) collagen alpha-1(X) chain
  KO
K19479  collagen type X alpha
Organism
oki  Oncorhynchus kisutch (coho salmon)
SSDB
Motif
Pfam: Collagen C1q BclA_C
Other DBs
NCBI-GeneID: 109866462
NCBI-ProteinID: XP_020310736
Ensembl: ENSOKIG00005012546
UniProt: A0A8C7FK31
LinkDB
Position
LG21:14340698..14346961
AA seq 661 aa
MDLRVTSVLLLLVALAVATPERYYHVQKVAKQQQHYPTKSHVQTVSGEPGIPGSPGEPGP
MGPPGPPGNNGVGHQGQQGPPGAPGPAGYSAAGKPGNPGGPGKPGSNGMPGEKGHTGAPG
AMGPRGSPGSAGSPGPAGYSSAGKPGPHGLPGGMGPRGESGLKGHPGIPGLQGQKGERGV
GIPGAPGANGQVGPMGPSGMPGQPGVGKSGATGYPGEPGKSGTPGRDGAPGAMGQPGPKG
HNGNPGVGAPGKSGENGSPGMPGNMGPKGPQGHAGQPGAPGLPGVGKPGANGMTGDRGSP
GTSGTTGQKGEPGPTGYTGATGGTGLMGPAGPQGARGFQGEPGVQGSKGDVGMLGAPGAK
GTKGDQGHQGYAGKAGIPGAAGPPGATGATGHQGNKGAQGHAGSPGQPGSNGLAGAKGHP
GTPGGPGKPGESGIPGTRGPVGPSGPAGQAGLRGHAGLPGAPGPAGQMAKGMSGPMGPPG
APGSRGNDGNPGAMGPPGLPGPPGEMVYHHEKSMPIKSHEIMMPHEMMKAPMSAFSAVLT
VAYPSAGSPVPFNQIIYNGEQHYDPQTGIFSCQVPGLYYFSYHMHVNGANALVALYKNGE
PIMFSYDEYNKGFLDQLSGSTVLMLNAHDQVYIQVPDEETNGVFAADNVHCSFSGFLIAS
T
NT seq 1986 nt   +upstreamnt  +downstreamnt
atggacctcagagtgacaagcgttctcctcctcctggtggccttggccgtggcaacacca
gagagatactaccatgtacagaaagtagccaagcagcagcagcattatcctaccaagagc
catgtccaaactgtttcaggtgagccaggtattcccggatcccctggtgagccaggacct
atgggcccccctgggcctcccggcaataacggcgtgggacatcaaggacaacagggccca
cccggggcccccggacccgctggctactccgcagctggcaagcctggcaatccaggtggt
cccgggaaaccaggtagtaacggaatgcccggtgagaagggccatactggcgcacctgga
gccatgggtccaagaggatcacccggttccgctggaagcccaggacctgctggatactct
tctgctggcaaacctggcccacacggtctgcccggaggcatggggccaaggggtgagagt
ggacttaaagggcatccaggtatccctggtctgcaaggacaaaagggagagaggggagtt
ggtattcctggggcaccaggtgcaaacggccaagtgggcccaatgggaccctctggtatg
ccagggcaacccggagttggtaagtctggtgccactggataccctggggagcctgggaag
tcaggtactccaggtagggatggagctccaggagctatgggtcagccagggccaaagggc
cacaatggaaaccctggggtaggagcgccaggaaaatcaggtgagaatggcagtccaggt
atgcctggaaatatgggacctaaaggtccccagggacatgccggacaaccaggtgcacct
ggcttaccaggagttggtaaaccaggagctaatggcatgacaggtgacagaggatccccc
ggtacatcaggaaccaccggtcagaaaggagagccagggccaacaggttacactggggca
acaggtggtactggccttatgggtccagctgggccacagggtgctagaggattccaggga
gaaccaggtgtgcagggatctaaaggagatgtcggcatgctgggagctccaggggcaaag
ggaaccaagggggatcagggacatcagggttacgcagggaaggcaggtatccccggggca
gcaggccctcctggtgcaaccggcgctacaggacatcagggtaacaagggagctcagggc
catgctggctctcctggtcagccaggttcaaatgggcttgcaggagcaaagggacaccca
ggcacacctggaggcccagggaaaccaggcgagagcggcatcccagggacaagaggacca
gtggggccttcaggtccagcaggtcaagcaggtcttaggggtcatgcaggtcttcccggc
gcacccggcccagctggccagatggccaagggaatgtctggtcctatgggtccacctgga
gctcctggttccagaggtaacgatggtaacccaggtgctatgggacctcctggcctacct
ggtccccctggtgagatggtctaccatcacgagaagagcatgcccatcaagtcccatgag
attatgatgcctcatgagatgatgaaggcccctatgtccgccttcagcgcggttctgacg
gtggcttacccatcagcgggttcacccgttccattcaaccagattatttacaatggggag
cagcactatgacccccagactggcatcttctcctgccaggtaccaggtctctactacttc
tcctaccatatgcatgttaacggtgctaatgcattggtggcactgtacaaaaatggtgag
ccaatcatgttctcatacgatgagtacaacaagggcttcttggatcagttgtctggcagc
actgtacttatgctgaatgcccatgaccaggtctacattcaggtccctgatgaggagacc
aatggtgtcttcgctgccgataatgttcactgctctttctctgggttcctgattgcctca
acgtga

DBGET integrated database retrieval system