Oncorhynchus kisutch (coho salmon): 109866534
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Entry
109866534 CDS
T09179
Symbol
gtf3c2
Name
(RefSeq) general transcription factor 3C polypeptide 2
KO
K15200
general transcription factor 3C polypeptide 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
109866534 (gtf3c2)
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
109866534 (gtf3c2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_IFT140_1st
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_NOL10_N
Beta-prop_VPS8
Beta-prop_WDR3_2nd
HC2
Motif
Other DBs
NCBI-GeneID:
109866534
NCBI-ProteinID:
XP_020310835
Ensembl:
ENSOKIG00005047181
LinkDB
All DBs
Position
LG21:20176376..20196652
Genome browser
AA seq
1045 aa
AA seq
DB search
MPVTESCTVRLLKLPLTKKSCSVNLSRLSVIKKRCSVRLSRLLVTDNWCSVRLCRLPVTK
WCSVKLSTLPVTQKRCSVRLSRLLMATIAQKLGKQGSESMGLPHGEETEQQTDPHEKPQA
EAQTNPHEKPQDTNGEAVGVSSEQGQDVPPEELPVPSSTPGNRLQRKRVPNPKYQREPDT
TNLQCPDSTKKPRKKMGLKISVVSNTETDQQDTDKKTPKPPKKTPAKKTPQKKAPQKKPV
VSSIDSDKGLIKQTPAKKTSAKKIQKETPQVNSTPAPAVPELRETPEEPETTPSGRPKRR
AAKAALQYLHTLAKEVYNQPDKGTKNDWESSPVPSPSSTQPQKRTRGKGKKRKAPDFDSD
NAAEDVDFVPENQDTEEESEAEDTQEDLDLEKRHTPLKDLRSRRISRGLSSQVRYHGNSP
NGLSNNMMGPIWMCTKTTKTFRDEHCNEWVFAEWMPSEKDWHCLSDSEAEKYLPQEMMST
AFTFSREGIREETPLHRMKRFECLKPHPERWDMLFYTGGPVWAMDWCPSPDGAPASQYAA
IYCHRNLDDQHRMNELYTKPGLIQIWDLGQLQYNTSPQSSPRLAYGIAQDKGFVWNLKWC
PGGAWELPTTNRKAPHMPRLGLLAASTSDGHITIYSLPHPDTLMARRKHTAKGGACPTLM
ICQVQGVITLKRGAFKTNHDEKNNQVLSMDWLPVKPHNILAAGFYDGTVALWNLSSKSIL
QRVRAPDRSFTLYPYHCFIAHDNATRALSFCHASRDLMVTAGDDRLVKMWDLRRTWEPCQ
SFKRFLSTEAAWPLHWAGVFISQESTYATFGQHGLNYFDSGYLGFKPLFLVPRKGTMWSL
SISDWLNTAVTADSVGDVIMVLIPNLFNNPCYLKRSIDRRFPVFRTEMVQLKEEVEENEG
GVGEEGSGSTSNGTSHHIPQTYRETAQKYYLHYHDMDMRTFKNAQSRAPWKHMQVAEAKG
GPCLDLMPLASLTKVRFNPNLCAQSWVLSGGQAGLVRAHCLRAMNSSHINKMVQESQAQF
STMFPQDTTDSQGDASAVRHTTEKL
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgacagagagttgcacagttaggctgttgaagctgcctctcaccaagaagagt
tgctcagtaaacttgtctaggctttctgtgataaagaagaggtgctcagtaaggctgtca
aggcttcttgtgacagataattggtgctccgtaaggttgtgtaggctacctgtgacaaag
tggtgctcagtaaagttatctactctgcctgtgacgcaaaagcgttgctcagtaaggttg
tctaggctgttgatggcaaccattgcccagaagttgggcaaacagggtagcgaatccatg
ggcttaccccatggagaggagacagagcagcagactgatccacacgaaaaacctcaggca
gaggcgcagaccaatccacatgaaaaaccacaggacaccaatggggaggctgtcggtgtt
tcatctgaacaaggccaggatgtgcctccagaagagcttcctgtaccatcttccaccccg
ggaaatcgtctacagagaaaaagagtccctaatccgaaatatcagagagaaccagacacg
accaacctacaatgtcctgactcaacaaaaaagccaaggaaaaagatgggcctgaaaata
tccgtagtctctaacacagaaacagaccagcaggacactgacaaaaagaccccaaaaccc
cccaaaaagacacctgccaaaaagacaccacagaaaaaggcaccacagaaaaagccagtg
gtctcgagcatagacagtgacaaggggcttatcaaacagacccctgccaagaagacctct
gccaagaagatacaaaaggaaacaccacaggtcaactccacgcccgcccctgcagtcccg
gaactgagggagaccccagaggagcctgaaaccacccctagtggcagacccaagcggagg
gcagcaaaagctgcattgcagtacctccataccctggccaaggaggtatacaaccaacct
gacaagggtactaagaatgactgggagtctagcccagtccccagccccagctcaacccag
ccccagaaacgaaccagaggcaagggcaagaagaggaaggcccctgattttgacagtgac
aacgccgcagaggatgtggactttgttccagaaaatcaagacactgaggaggaaagtgag
gctgaagatactcaagaagacttagacttggagaagaggcacacaccactgaaagacctt
agatccagacgcatttccagaggtctttcaagtcaagttcgataccatggtaattccccc
aatggactgtccaacaacatgatgggacccatctggatgtgcaccaaaaccaccaagacc
ttccgtgatgaacactgtaacgaatgggtctttgctgagtggatgccttcagagaaggat
tggcattgcttgtcggacagtgaggctgagaagtatctaccgcaggagatgatgtcaaca
gccttcaccttctcaagagagggcatcagggaggagactcctctgcacagaatgaagagg
tttgagtgcctgaaaccccaccctgagcgctgggacatgctattctatacgggcggccca
gtgtgggccatggactggtgcccctcccccgatggcgcccctgccagccagtacgctgcc
atctactgccacaggaacctggacgaccaacacaggatgaacgagttgtacaccaaacct
ggactcatccagatttgggacctgggacaactccagtacaacaccagtccccagtcctct
ccacggctggcctatggtattgcccaggataaaggctttgtgtggaacctgaagtggtgt
ccaggaggagcctgggagctgcccaccactaacaggaaggcccctcatatgcccagactg
ggtctcctggctgcttccacatcagatggtcacatcactatctacagcctgcctcaccct
gacacactaatggcccgcaggaaacacaccgctaaaggtggagcctgcccaacactgatg
atctgccaggtacagggtgtgatcactctgaagcggggcgccttcaagaccaaccacgat
gaaaagaataaccaggttctctccatggactggctgcctgtcaaacctcacaatatcctg
gctgctggcttctatgatggtacggtggccctgtggaacctgtccagtaagtctattctg
cagcgggtgcgtgctccagaccgctccttcaccctctacccctaccactgcttcatcgcc
cacgacaacgccacccgcgccctcagtttctgccacgcatccagagacctcatggtgacg
gcgggtgatgacaggctggtgaagatgtgggacctgaggaggacctgggagccctgccag
tccttcaagcgcttcctctccaccgaggcggcctggcccctgcactgggctggggtcttc
atctctcaggagagcacctacgccacgtttggccaacatggactcaattactttgactca
gggtatctgggcttcaagccactctttctggtgccacggaaagggaccatgtggagcctg
tcgatctctgattggctgaacacagctgtgacggcggactcggtgggagacgtgatcatg
gtcctaatacccaacctgttcaacaacccctgctacctcaaacgatccatcgatcgcaga
ttcccggtgttcagaaccgaaatggtccaattgaaagaagaagttgaggagaatgaggga
ggagttggagaggaaggaagtggttccaccagtaacggaacatcccatcatatacctcag
acctacagagagacagcccagaagtactacctccactaccacgacatggacatgagaacg
tttaagaatgcccagagccgagctccgtggaagcacatgcaggttgcagaggccaaaggg
ggaccgtgtctggacctaatgcctttggcttcactaactaaggtccgtttcaaccccaac
ctgtgtgcccagagctgggtgttgtctgggggccaggcgggcctggtaagagcccactgc
ctcagggccatgaacagctctcacattaacaagatggtgcaggagagccaggcccagttc
agcaccatgttcccccaggacacgacagacagccagggggacgcaagtgccgtcagacac
accacagaaaagctgtag
DBGET
integrated database retrieval system
