Oncorhynchus kisutch (coho salmon): 109866606
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Entry
109866606 CDS
T09179
Name
(RefSeq) syntaxin-binding protein 5 isoform X2
KO
K08518
syntaxin-binding protein 5
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109866606
Membrane trafficking [BR:
oki04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109866606
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
109866606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WD40
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_NUP159_NUP214
Lgl_C
KNTC1_N
Beta-prop_VPS8
Beta-prop_Vps41
CFAP43_N
Beta-prop_WDR35_TULP_N
Synaptobrevin
WD40_like
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
109866606
NCBI-ProteinID:
XP_020310948
Ensembl:
ENSOKIG00005028727
LinkDB
All DBs
Position
LG21:25694388..25842234
Genome browser
AA seq
1147 aa
AA seq
DB search
MKKFNIRKVLDGLKEQASSSVSSGQSGAPENNLMHETLQSENFQLCKTVRHGFPYQPSSM
AHDPVQKILAIGTQSGALRLFGRPGVECYCQHESGAAVISLQFLINEGALVSALADDSVH
LWNLRQRRPAILHSLKFNRERITFVHLPFQSKWLYIGTEKGNIHIVNVESFTLSGYVIMW
NKAIELSSKAHPGPVVHISDNPMDEGKLIIGYEAGIVVLWDLKSKKADYRYTYDEAIHSV
AWHHEGKQFICSHSDGTLTIWNIKGQGKPFQTITPHGKQPKDGKKPEPCKPILKVEYKTT
RLGDPFMILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYSNDFQEPY
AVVVLLEKDLVVIDLAQNGYPIFENPYPLTIHESPVTCCEYFADCPVDLIPALYSVGSRQ
KRQGYSKKEWPISGGNWGLGTQSYPEIIITGHADGTVKFWDASAIMLQVLYKLKTAKVFE
KSRNNKEDKQNTEIVEEDPFAIQIMAWCPESRMLCVAGVSANLIIYRFSKQEITTEVVQL
LEVRLQYEVNDMESPPEGGGGGDRDLPTPGAASPSPQTTGPPTHPSTSSNSSDGVRDNVP
CLKVRSTPLKQSSGYQVELVVQLVWVSGEPPQQITSLALNSSYGLIVFGNSNGLAVVDYL
QKTVLLNLGTVELYGSNDPYQRQARSPRKARQPAGGLCDINEGSASEDRCKSPTSVLASN
HQQFYNGGGGRGAKMSRKLSLPTELKPDLVLLSVCPPRGANPLDHRDNSFSRSRSSSVTS
IDKEAREAITSFHFCETFARKGDSAITPCLYVGTSLGTVLAVALNLPPAGEQRLLQPVIV
LPSGTLARLKGSILRMAFLDNTGTFLPPAFETWYEPNAAGADSEERDKARKRRPVSVSPS
TSQELQESQYAVVCSEKQAKVIALPSQNCIFKHSITETSFVLRADVVQMNIGNCVACFCA
NGHIMTLSLPGLRPLLDVNYLPLTDMRIARTFCFTNLGQAMYLTSPTEIQRITYSQETCE
NLQEMLGELFTPVETPEAPNRGFFKGLFGGGATSLDREELFGETQAGKASRGLAQHIPGP
QGLEGMKGAASGVVADLARARIALDERGQKLGELDERTAAMLASADSFGKHAHDMMLKCK
DKKWYQF
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaacatcaggaaggtgctggacggcctaaaggagcaggcgtcttcctct
gtttcgtctggccagtcgggcgccccggagaacaatttgatgcacgagacccttcaatcc
gagaattttcagctctgcaagactgtccgtcatggcttcccctatcagccgtcgtccatg
gcccatgacccagtccagaagatcctggccattgggacccagagtggggccctcagactg
tttggtcgtccaggtgtggagtgctactgtcaacatgagagtggagcagccgtcatctcg
ctacagtttctcatcaatgagggggcgctggtgagtgctctggcagacgacagcgtgcac
ctctggaacctgaggcagaggaggcccgccatcctccactcgctcaagttcaacagagag
aggatcacattcgtccacctgcccttccagagtaaatggctgtacatcggcacagagaaa
ggaaacatccacatcgtcaacgtggagtcgttcacactctcaggctacgtcatcatgtgg
aacaaagccatcgaactatcctccaaggcccacccaggtcctgtggtccacataagtgac
aaccccatggatgagggaaagctcatcattggatatgaggctggaattgtggtcttgtgg
gatctgaaatctaagaaagcagactaccgctacacttacgacgaggcgatccactcggtt
gcctggcaccatgagggcaagcagttcatctgtagtcactcagacggaacgctcaccata
tggaacatcaagggccagggcaagccatttcagacaatcaccccacatggaaagcagccc
aaggatggaaagaagccagagccctgcaaacccatcctcaaagtggaatacaagaccact
agactgggagaccccttcatgatcctgtctggaggtctgtcgtatgacacggtgggtcgg
cggccatgtctgacggtgatgcatgggaagagtacagccgtgctggagatggactatcct
atcgtagacttcctcacgctctgtgagacgccatactctaacgattttcaggaaccttat
gctgtagtggtccttctagaaaaggatttagttgtaatcgaccttgcacaaaatggttac
cccatattcgagaacccctatccactgaccattcatgagtctccagttacctgctgtgag
tactttgctgactgccctgtggacctcatacccgcactttactctgttggctccagacag
aaacgacagggctatagcaaaaaggagtggccaatcagtggtggtaactggggcctcggc
acacagagctaccctgagatcatcatcactgggcatgctgatgggactgtgaagttttgg
gatgcttctgcaataatgctccaggtactgtacaagctgaagacggccaaggtgtttgag
aagagcaggaataataaggaggacaagcagaacacagagattgtggaagaggacccgttt
gccatccagatcatggcttggtgtcctgagagcaggatgctgtgtgtggccggggtgtct
gccaacctcatcatataccgcttcagcaagcaggagatcaccaccgaggtcgtacagctg
ttggaggtacgtctgcagtacgaggtgaatgacatggagtcccctccagaggggggagga
gggggggaccgtgacctgcccaccccaggagcagcctcacctagcccccagaccaccgga
cccccgactcacccctccaccagcagcaactcctctgacggggtccgagacaacgtaccc
tgcctcaaggtgcgtagtacccctctgaagcagtcttcagggtatcaggtagagttggtg
gtgcagctggtgtgggtaagtggagagcccccccaacagatcaccagcttggccctcaac
tcctcctacggcctgattgtgtttgggaacagtaatggtctggcagtggtggactacctc
cagaagacagtgctgttgaacctggggacagtggagctgtatgggtctaacgatccctac
cagagacaggctcgctctccacgcaaggcacgccagcccgccggaggtctgtgtgacatc
aacgagggttctgcctcggaggaccgctgcaaatcccccacttcagtgttggcgtcaaac
catcagcaattctacaatggaggtgggggtagaggagcaaagatgtcacggaaattaagc
ttgcctactgagctaaagccagacttggtcctcctgtctgtatgtcctccacggggcgcc
aacccattagaccaccgggacaactccttcagccgttcacgctcctcctccgtcacgtcc
atcgacaaggaggcgcgcgaggccatcacctccttccacttctgtgagacattcgcccgg
aagggggacagcgccatcacaccatgcctatacgtgggaacctccctgggaacagtgctg
gctgtggccctcaacctgccccctgctggggaacaaaggctgctgcagcccgttatcgtc
ttacctagcggtacccttgcacgactgaagggcagtatcctgaggatggccttcctggac
aacacaggaacctttctcccccctgccttcgagacctggtatgagccaaacgctgcgggc
gctgacagtgaggagcgagacaaggcccgtaaacgccgcccggtctctgtgtcgccctcc
acctcccaggagctgcaggagagccagtatgcggtggtgtgctctgagaaacaggctaag
gtcatagcactgccctcacagaactgcatcttcaaacacagcatcacagagacatcgttc
gtcctgagggctgacgtggtccagatgaacatagggaactgtgtggcctgcttctgtgct
aacggacacatcatgaccctcagtctgccggggctgagaccgttgctggatgtaaactac
ctgccactgacagacatgcggatagcccggactttctgctttaccaacctgggccaggcc
atgtacctcacctcccccactgagatacagaggatcacatacagtcaggagacctgtgag
aacctacaggagatgctgggagaactgttcacaccagtggaaaccccagaggctcccaac
cgaggattcttcaagggcctttttgggggaggagcaacttccctggacagagaggaacta
tttggtgagacgcaggcaggtaaggcgtcccgtggccttgcccagcacatcccaggtcct
cagggcctggagggcatgaagggggcagcctcgggcgtggtggccgacctggcgcgtgcc
cggatagcactggatgagagagggcagaaactgggcgagctggacgagaggacggctgcc
atgttggccagcgccgactcctttggcaaacacgcccacgacatgatgctgaagtgcaaa
gacaagaagtggtaccagttctga
DBGET
integrated database retrieval system
