Oncorhynchus kisutch (coho salmon): 109866651
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Entry
109866651 CDS
T09179
Symbol
dync1i2
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2 isoform X2
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04145
Phagosome
oki04814
Motor proteins
oki05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109866651 (dync1i2)
09142 Cell motility
04814 Motor proteins
109866651 (dync1i2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109866651 (dync1i2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109866651 (dync1i2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109866651 (dync1i2)
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
109866651 (dync1i2)
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
109866651 (dync1i2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML
WDR55
Dynein_IC2
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
ANAPC4_WD40
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
109866651
NCBI-ProteinID:
XP_020311022
Ensembl:
ENSOKIG00005023812
LinkDB
All DBs
Position
LG2:43475278..43496803
Genome browser
AA seq
609 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEDERKKKEADSKKDAVPIDDSDLEKKRRETDA
LLQSMGITSADVPVVPPPMSPTCKSVGTPSEAGSQDSGDGAVGPRRGPLKMGMAKITHVD
FPPKETVSYTKETQTPVMTQQKEEEEEEEEEVAPPQQVLEAQTEKPVQKEEEEAPPQELT
EEEKLQILHSEQFITFFDHSTRIVERALSEHVDVFFDYSGREMEEKEGEIQAGAKLFLNR
QFMDERWSKHRVVTCLDWSAQYPELLVASYNNNEEAPHEPDGVALVWNMKYKKNTPEYVF
HCQSAVMSAAFAKFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVNV
LGTQNANNLISISTDGKMCSWSLDMLSQPQDSLELVLKQSKAVAVTSMSFPLGDVNNFAV
GSEDGSVYMACRHGSKAGISEMFEGHHGPITGIDCHTATGPVDFSHLFVTSSFDWTVKLW
STKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGVGHLDLWNLNNDTEVPTASTTVEG
NPALNRVRWAHSGKEIAVGDSDGQILVYDVGEQIAVPRNDEWTRFVRTLAEINENRDDAE
ELAAQRLSA
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaaaagcgagctaaaagcggaacttgaaaggaagaagcaacgcctggctcag
atcagggaggagaaaaaaaggaaggaagatgagcgcaaaaagaaagaggctgactcgaag
aaagatgcagtcccaatagatgactcagacttagagaaaaagagacgtgagacagatgcc
cttctgcagagcatgggcatcacgtcagctgatgttcctgttgtccctcctcccatgtct
ccaacctgcaaatccgtgggcacaccaagcgaggcagggagccaagactcgggcgacggc
gccgtgggacccaggcggggacctctgaagatgggcatggccaagatcacccatgttgac
ttccctccaaaagagactgtgtcgtacaccaaggagacccagacacctgtgatgacccag
cagaaagaagaggaagaagaagaggaggaggaagttgctccaccacaacaagtgcttgag
gcccaaacagagaaacctgtccagaaagaggaggaggaagcacctccacaagagctgacc
gaggaggagaagctgcagatcctccactctgagcagttcataaccttctttgaccacagc
acccgcatcgtggagcgggccctgtctgaacatgtggacgtcttcttcgactacagtggt
cgcgagatggaggagaaggagggtgagatccaggcaggggccaagctgtttctgaacagg
cagtttatggacgagcgctggtccaagcaccgtgtggtcacctgtctggactggtccgct
cagtatcctgagctgctggttgcctcatacaacaacaacgaggaagccccccacgagccg
gacggggtggccctggtctggaacatgaagtacaagaagaacacgccggaatacgtcttc
cactgccagtctgcagtgatgtcggccgcctttgccaagttccaccctaacctggtggtg
gggggcacctactcagggcagatcgttctgtgggacaaccggagcaacaagaggacccct
gtacagaggacccccctgtcagccgcagcacacacgcacccagtgtactgtgtgaacgtg
ctgggcacccagaacgccaacaacctcatcagcatctctaccgacggcaagatgtgttcc
tggagcctggacatgctgtctcagccgcaggacagcctggagctggtgttgaagcagtcg
aaggccgtcgctgtcacctccatgtctttccccctcggggatgtcaacaactttgcggtg
gggagcgaggacggttctgtctacatggcatgtcgtcatggaagtaaagcagggatcagt
gagatgtttgagggccaccacgggcctatcacagggatagactgtcacacagcgaccggg
cccgtcgacttctcccacctgtttgtcacctcctccttcgactggaccgtcaagctgtgg
agcactaagaacaacaagccgctgtactcgttcgaggacaactcggattacgtctacgac
gtcatgtggtctcccactcacccggcgctgtttgcatgtgtggatggagtgggccatctt
gacctgtggaacctcaacaatgacactgaggttcctacagccagtaccacagtggagggg
aacccagccctgaaccgcgtgcgatgggcccattccggcaaagagattgccgtgggagac
tctgatggacagattctggtctatgatgttggagagcaaatcgccgttccacgcaacgac
gagtggacccgtttcgtccgaaccctggcggagatcaacgagaaccgggacgacgcagag
gagctggccgctcagcgcctctctgcctga
DBGET
integrated database retrieval system
